SecReT4

T4SS
References

T4SS ID	505
Strain	Ehrlichia ruminantium str. Gardel
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_006831
Location	12170..18481; 856552..876198; 1254693..1255469; 1343161..1351345; 1343161..1351345
Name	VirB
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	0	4	1	2	0	4	0	1	2
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_006831
Region 1: 12170..18481

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ERGA_CDS_00090	7804..8553 [+], 750	58616736	hypothetical protein
2	ERGA_CDS_00100 (nadA)	8568..9515 [+], 948	58616737	quinolinate synthetase
3	ERGA_CDS_00110 (fdxA)	9675..10052 [-], 378	58616738	ferredoxin
4	ERGA_CDS_00120	10263..11528 [+], 1266	58616739	hypothetical protein
5	ERGA_CDS_00130 (virD4)	12170..14572 [-], 2403	58616740	type IV secretion system component VirD4	VirD4
6	ERGA_CDS_00140 (virB11)	14613..15611 [-], 999	58616741	type IV secretion system ATPase VirB11	VirB11
7	ERGA_CDS_00150 (virB10)	15635..16975 [-], 1341	58616742	VirB10 protein	VirB10
8	ERGA_CDS_00160 (trbG)	16996..17799 [-], 804	58616743	conjugal transfer protein trbG precursor	VirB9
9	ERGA_CDS_00170	17783..18481 [-], 699	58616744	hypothetical protein	VirB8
10	ERGA_CDS_00180 (ribA)	18637..19752 [-], 1116	58616745	GTP cyclohydrolase II
11	ERGA_CDS_00190	21573..22637 [-], 1065	58616746	hypothetical protein
12	ERGA_CDS_00200	22713..23192 [-], 480	58616747	hypothetical protein

Region 2: 856552..876198

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ERGA_CDS_05330 (ispH)	851584..852582 [+], 999	58617260	4-hydroxy-3-methylbut-2-enyl diphosphate reductase
2	ERGA_CDS_05340 (dut)	853598..853972 [+], 375	58617261	deoxyuridine 5-triphosphate nucleotidohydrolase
3	ERGA_CDS_05350	854936..855535 [+], 600	58617262	hypothetical protein
4	ERGA_CDS_05360	856552..863454 [-], 6903	58617263	hypothetical protein	VirB6
5	ERGA_CDS_05370	863472..868247 [-], 4776	58617264	hypothetical protein	VirB6
6	ERGA_CDS_05380	868129..870861 [-], 2733	58617265	hypothetical protein	VirB6
7	ERGA_CDS_05390	870999..873464 [-], 2466	58617266	hypothetical protein	VirB6
8	ERGA_CDS_05400 (virB4)	873497..875902 [-], 2406	58617267	type IV secretion system ATPase VirB4	VirB4
9	ERGA_CDS_05410	875899..876198 [-], 300	58617268	type IV secretion system protein VirB3	VirB3
10	ERGA_CDS_05420 (sodB)	876584..877216 [-], 633	58617269	superoxide dismutase
11	ERGA_CDS_05430 (pstA)	877482..878744 [+], 1263	58617270	phosphate ABC transporter permease

Region 3: 1254693..1255469

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ERGA_CDS_07820	1252488..1253333 [+], 846	58617509	hypothetical protein
2	ERGA_CDS_07830 (pdhA)	1253556..1254545 [+], 990	58617510	pyruvate dehydrogenase E1 component, alpha subunit
3	ERGA_CDS_07840 (trbG)	1254693..1255469 [+], 777	58617511	conjugal transfer protein TRBG precursor	VirB9
4	ERGA_CDS_07850 (trx)	1255560..1255883 [+], 324	58617512	thioredoxin
5	ERGA_CDS_07860	1257808..1259025 [-], 1218	58617513	hypothetical protein
6	ERGA_CDS_07870 (xseB)	1260059..1260247 [-], 189	58617514	exodeoxyribonuclease VII small subunit

Region 4: 1343161..1351345

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ERGA_CDS_08350 (virB4)	1343161..1345533 [-], 2373	58617562	VirB4 protein	VirB4
2	ERGA_CDS_08360	1347206..1347622 [-], 417	58617563	hypothetical protein	VirB2
3	ERGA_CDS_08370	1347876..1348241 [-], 366	58617564	hypothetical protein	VirB2
4	ERGA_CDS_08380	1349154..1349495 [-], 342	58617565	hypothetical protein	VirB2
5	ERGA_CDS_08390	1350971..1351345 [-], 375	58617566	hypothetical protein	VirB2
6	ERGA_CDS_08400	1351895..1352095 [+], 201	58617567	hypothetical protein
7	ERGA_CDS_08410 (hflK)	1352150..1353220 [+], 1071	58617568	protease activity modulator hflk
8	ERGA_CDS_08420 (hflC)	1353232..1354104 [+], 873	58617569	Hflc protein
9	ERGA_CDS_08430 (degP)	1354104..1355534 [+], 1431	58617570	serine protease do-like precursor
10	ERGA_CDS_08440	1355542..1356156 [+], 615	58617571	hypothetical protein

Region 5: 1343161..1351345

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ERGA_CDS_08350 (virB4)	1343161..1345533 [-], 2373	58617562	VirB4 protein	VirB4
2	ERGA_CDS_08360	1347206..1347622 [-], 417	58617563	hypothetical protein	VirB2
3	ERGA_CDS_08370	1347876..1348241 [-], 366	58617564	hypothetical protein	VirB2
4	ERGA_CDS_08380	1349154..1349495 [-], 342	58617565	hypothetical protein	VirB2
5	ERGA_CDS_08390	1350971..1351345 [-], 375	58617566	hypothetical protein	VirB2
6	ERGA_CDS_08400	1351895..1352095 [+], 201	58617567	hypothetical protein
7	ERGA_CDS_08410 (hflK)	1352150..1353220 [+], 1071	58617568	protease activity modulator hflk
8	ERGA_CDS_08420 (hflC)	1353232..1354104 [+], 873	58617569	Hflc protein
9	ERGA_CDS_08430 (degP)	1354104..1355534 [+], 1431	58617570	serine protease do-like precursor
10	ERGA_CDS_08440	1355542..1356156 [+], 615	58617571	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Frutos R; Viari A; Ferraz C; Morgat A; Eychenie S; Kandassamy Y; Chantal I; Bensaid A; Coissac E; Vachiery N; Demaille J; Martinez D (2006). Comparative genomic analysis of three strains of Ehrlichia ruminantium reveals an active process of genome size plasticity. J Bacteriol. 188(7):2533-42. [PudMed:16547041]