SecReT4

T4SS
References

T4SS ID	499
Strain	Ehrlichia ruminantium str. Welgevonden
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_006832
Location	12114..18434; 863430..880589; 1267138..1267914; 1355672..1363881
Name	VirB
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	0	4	1	2	0	4	0	1	2
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_006832
Region 1: 12114..18434

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ERWE_CDS_00090	7828..8577 [+], 750	58578673	hypothetical protein
2	ERWE_CDS_00100 (nadA)	8592..9539 [+], 948	58578674	quinolinate synthetase
3	ERWE_CDS_00110 (fdxA)	9699..10076 [-], 378	58578675	ferredoxin
4	ERWE_CDS_00120	10287..11462 [+], 1176	58578676	hypothetical protein
5	ERWE_CDS_00130 (virD4)	12114..14519 [-], 2406	58578677	type IV secretion system component VirD4	VirD4
6	ERWE_CDS_00140 (virB11)	14560..15558 [-], 999	58578678	type IV secretion system ATPase VirB11	VirB11
7	ERWE_CDS_00150 (virB10)	15582..16928 [-], 1347	58578679	VirB10 protein	VirB10
8	ERWE_CDS_00160 (trbG)	16949..17752 [-], 804	58578680	conjugal transfer protein trbG precursor	VirB9
9	ERWE_CDS_00170	17736..18434 [-], 699	58578681	hypothetical protein	VirB8
10	ERWE_CDS_00180 (ribA)	18590..19705 [-], 1116	58578682	GTP cyclohydrolase II
11	ERWE_CDS_00190	21492..22556 [-], 1065	58578683	hypothetical protein
12	ERWE_CDS_00200	22632..23111 [-], 480	58578684	hypothetical protein

Region 2: 863430..880589

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ERWE_CDS_05450	859350..859961 [+], 612	58579209	hypothetical protein
2	ERWE_CDS_05460	860977..863337 [-], 2361	58579210	hypothetical protein
3	ERWE_CDS_05470	863430..867902 [-], 4473	58579211	hypothetical protein	VirB6
4	ERWE_CDS_05480	867920..872629 [-], 4710	58579212	hypothetical protein	VirB6
5	ERWE_CDS_05490	872511..875246 [-], 2736	58579213	hypothetical protein	VirB6
6	ERWE_CDS_05500	875384..877855 [-], 2472	58579214	hypothetical protein	VirB6
7	ERWE_CDS_05510 (virB4)	877888..880293 [-], 2406	58579215	type IV secretion system ATPase VirB4	VirB4
8	ERWE_CDS_05520	880290..880589 [-], 300	58579216	type IV secretion system protein VirB3	VirB3
9	ERWE_CDS_05530 (sodB)	880972..881616 [-], 645	58579217	superoxide dismutase
10	ERWE_CDS_05540 (pstA)	881869..883131 [+], 1263	58579218	phosphate ABC transporter permease

Region 3: 1267138..1267914

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ERWE_CDS_07910	1264937..1265782 [+], 846	58579455	hypothetical protein
2	ERWE_CDS_07920 (pdhA)	1266004..1266990 [+], 987	58579456	pyruvate dehydrogenase E1 component, alpha subunit
3	ERWE_CDS_07930 (trbG)	1267138..1267914 [+], 777	58579457	conjugal transfer protein TRBG precursor	VirB9
4	ERWE_CDS_07940 (trx)	1268005..1268328 [+], 324	58579458	thioredoxin
5	ERWE_CDS_07950	1270253..1271494 [-], 1242	58579459	hypothetical protein
6	ERWE_CDS_07960 (xseB)	1272523..1272711 [-], 189	58579460	exodeoxyribonuclease VII small subunit

Region 4: 1355672..1363881

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ERWE_CDS_08440 (virB4)	1355672..1358044 [-], 2373	58579508	VirB4 protein	VirB4
2	ERWE_CDS_08450	1359722..1360132 [-], 411	58579509	hypothetical protein	VirB2
3	ERWE_CDS_08460	1360393..1360758 [-], 366	58579510	hypothetical protein	VirB2
4	ERWE_CDS_08470	1361676..1362038 [-], 363	58579511	hypothetical protein	VirB2
5	ERWE_CDS_08480	1363495..1363881 [-], 387	58579512	hypothetical protein	VirB2
6	ERWE_CDS_08490	1363936..1364145 [-], 210	58579513	hypothetical protein
7	ERWE_CDS_08500 (hflK)	1364675..1365745 [+], 1071	58579514	protease activity modulator hflk
8	ERWE_CDS_08510 (hflC)	1365757..1366629 [+], 873	58579515	Hflc protein
9	ERWE_CDS_08520 (degP)	1366629..1368059 [+], 1431	58579516	serine protease do-like precursor
10	ERWE_CDS_08530	1368067..1368681 [+], 615	58579517	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Frutos R; Viari A; Ferraz C; Morgat A; Eychenie S; Kandassamy Y; Chantal I; Bensaid A; Coissac E; Vachiery N; Demaille J; Martinez D (2006). Comparative genomic analysis of three strains of Ehrlichia ruminantium reveals an active process of genome size plasticity. J Bacteriol. 188(7):2533-42. [PudMed:16547041]