SecReT4

T4SS
References

T4SS ID	45
Strain	Haemophilus influenzae plasmid ICEhin1056 (NC_011409)
Replicon	plasmid ICEhin1056 [Browse all T4SS(s) in this replicon]
Accession	NC_011409
Location	26989..48388
Name	Tfc
Function	Conjugation
Classification	Type IVC; Type G
Experimental investigation has been performed on this T4SS.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	1	1	1	1	1	1	1	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	1	1	1	1	1	1	1	1	1
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	1	1	1	1	1

The information of T4SS components from NC_011409

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	p1056.25 (tetA)	22897..24102 [+], 1206	209947541	putative tetracycline resistance protein
2	p1056.26c (tetC)	24215..24808 [-], 594	209947542	putative transcriptional regulator
3	p1056.27 (tetD)	24896..25312 [+], 417	209947543	putative regulatory protein
4	p1056.28c (tnp)	25322..26530 [-], 1209	209947544	putative transposase
5	p1056.30	26989..27753 [+], 765	209947545	hypothetical protein	Tfc1
6	p1056.31 (pilL)	27852..28481 [+], 630	209947546	putative lipoprotein precursor	Tfc2
7	p1056.32	28485..29225 [+], 741	209947547	putative exported protein precursor	Tfc3
8	p1056.33	29204..29962 [+], 759	209947548	putative exported protein precursor	Tfc4
9	p1056.34	29978..30484 [+], 507	209947549	putative exported protein precursor	Tfc5
10	p1056.35	30481..32730 [+], 2250	209947550	hypothetical protein	Tfc6
11	p1056.36	32741..33049 [+], 309	209947551	hypothetical protein	Tfc7
12	p1056.37	33049..33735 [+], 687	209947552	hypothetical protein	Tfc8
13	p1056.38	33866..34216 [+], 351	209947553	Putative exported protein precursor	Tfc9
14	p1056.39	34485..34886 [+], 402	209947554	hypothetical protein	Tfc10
15	p1056.40	34906..35277 [+], 372	209947555	hypothetical protein	Tfc11
16	p1056.41	35289..35918 [+], 630	209947556	putative exported protein precursor	Tfc12
17	p1056.42	35937..36806 [+], 870	209947557	hypothetical protein	Tfc13
18	p1056.43	36817..38217 [+], 1401	209947558	putative exported protein precursor	Tfc14
19	p1056.44	38227..38634 [+], 408	209947559	putative lipoprotein precursor	Tfc15
20	p1056.45	38650..41520 [+], 2871	209947560	hypothetical protein	Tfc16
21	p1056.46	41528..41935 [+], 408	209947561	hypothetical protein	Tfc17
22	p1056.47	41945..42268 [+], 324	209947562	hypothetical membrane protein	Tfc18
23	p1056.48	42277..43770 [+], 1494	209947563	hypothetical protein	Tfc19
24	p1056.49c	43826..44155 [-], 330	209947564	hypothetical membrane protein	Tfc20
25	p1056.50c	44575..44982 [-], 408	209947565	hypothetical protein	Tfc21
26	p1056.51c	44998..46998 [-], 2001	209947566	putative exported protein precursor	Tfc22
27	p1056.52c	47013..47939 [-], 927	209947567	hypothetical protein	Tfc23
28	p1056.53c	47951..48388 [-], 438	209947568	hypothetical protein	Tfc24
29	p1056.54	48763..49125 [+], 363	209947569	hypothetical membrane protein
30	p1056.55	49210..49443 [+], 234	209947570	hypothetical protein
31	p1056.56	49985..50890 [+], 906	209947571	putative antirestriction protein
32	p1056.57c (blaTEM1D)	50985..51845 [-], 861	209947572	beta-lactamase TEM precursor
33	p1056.58c	52028..52585 [-], 558	209947573	transposon Tn3 resolvase
34	p1056.59	52884..53201 [+], 318	209947574	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Juhas M; Crook DW; Hood DW (2008). Type IV secretion systems: tools of bacterial horizontal gene transfer and virulence. Cell Microbiol. 10(12):2377-86. [PudMed:18549454]

(2) Juhas M; Power PM; Harding RM; Ferguson DJ; Dimopoulou ID; Elamin AR; Mohd-Zain Z; Hood DW; Adegbola R; Erwin A; Smith A; Munson RS; Harrison A; Mansfield L; Bentley S; Crook DW (2007). Sequence and functional analyses of Haemophilus spp. genomic islands. Genome Biol. 8(11):R237. [PudMed:17996041]

(3) Juhas M; Crook DW; Dimopoulou ID; Lunter G; Harding RM; Ferguson DJ; Hood DW (2007). Novel type IV secretion system involved in propagation of genomic islands. J Bacteriol. 189(3):761-71. [PudMed:17122343]

(4) Mohd-Zain Z; Turner SL; Cerdeno-Tarraga AM; Lilley AK; Inzana TJ; Duncan AJ; Harding RM; Hood DW; Peto TE; Crook DW (2004). Transferable antibiotic resistance elements in Haemophilus influenzae share a common evolutionary origin with a diverse family of syntenic genomic islands. J Bacteriol. 186(23):8114-22. [PudMed:15547285]

This literature contains experimental investigation

This literature contains bioinformatics investigation