The information of T4SS components from NC_013532 |
| Region 1: 24206..25886 |
  |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | ACIS_00027 | 21462..22982 [+], 1521 | 269958275 | monovalent cation/H+ antiporter subunit D | | |
| 2 | ACIS_00028 (virB2) | 24206..24409 [-], 204 | 269958276 | type IV secretion system protein VirB2 | VirB2 | |
| 3 | ACIS_00030 | 25092..25352 [-], 261 | 269958277 | hypothetical protein | | |
| 4 | ACIS_00031 (virB2) | 25680..25886 [+], 207 | 269958278 | type IV secretion system protein VirB2 | VirB2 | |
| 5 | ACIS_00034 | 26436..27722 [-], 1287 | 269958279 | transporter | | |
| 6 | ACIS_00035 (rpsP) | 28013..28282 [+], 270 | 269958280 | 30S ribosomal protein S16 | | |
| 7 | ACIS_00037 (glmU) | 28435..29721 [-], 1287 | 269958281 | UDP-N-acetylglucosamine pyrophosphorylase | | |
| 8 | ACIS_00039 | 29899..30606 [-], 708 | 269958282 | short chain dehydrogenase | | |
| |
| Region 2: 82441..88843 |
 |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | ACIS_00083 | 77727..78461 [+], 735 | 269958316 | hypothetical protein | | |
| 2 | ACIS_00084 (dapF) | 78503..79300 [+], 798 | 269958317 | diaminopimelate epimerase | | |
| 3 | ACIS_00087 | 79376..79888 [+], 513 | 269958318 | hypothetical protein | | |
| 4 | ACIS_00088 | 79955..81049 [+], 1095 | 269958319 | methyltransferase | | |
| 5 | ACIS_00089 (ribA) | 81235..82323 [+], 1089 | 269958320 | GTP cyclohydrolase II | | |
| 6 | ACIS_00090 (virB8) | 82441..83130 [+], 690 | 269958321 | type IV secretion system protein VirB8 | VirB8 | |
| 7 | ACIS_00091 (virB9) | 83117..83956 [+], 840 | 269958322 | type IV secretion system protein VirB9 | VirB9 | |
| 8 | ACIS_00092 (virB10) | 83976..85313 [+], 1338 | 269958323 | type IV secretion system protein VirB10 | VirB10 | |
| 9 | ACIS_00093 (virB11) | 85371..86369 [+], 999 | 269958324 | type IV secretion system protein VirB11 | VirB11 | |
| 10 | ACIS_00094 (virD4) | 86417..88843 [+], 2427 | 269958325 | type IV secretion system protein VirD4 | VirD4 | |
| 11 | ACIS_00095 (infC) | 88840..89157 [+], 318 | 269958326 | translation initiation factor IF-3 | | |
| 12 | ACIS_00096 (ilvC) | 89187..90158 [-], 972 | 269958327 | ketol-acid reductoisomerase | | |
| 13 | ACIS_00097 (fdxA) | 90284..90655 [+], 372 | 269958328 | ferredoxin | | |
| 14 | ACIS_00098 (nadA) | 90676..91632 [-], 957 | 269958329 | quinolinate synthetase | | |
| 15 | ACIS_00099 | 91652..92431 [-], 780 | 269958330 | methylase | | |
| 16 | ACIS_00100 | 92554..93795 [+], 1242 | 269958331 | phage portal protein | | |
| |
| Region 3: 273359..278237 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | ACIS_00299 (virB2) | 273359..273832 [+], 474 | 269958489 | type IV secretion system protein VirB2 | VirB2 | |
| 2 | ACIS_00302 (virB2) | 274653..275018 [+], 366 | 269958490 | type IV secretion system protein VirB2 | VirB2 | |
| 3 | ACIS_00303 (virB2) | 275345..275686 [+], 342 | 269958491 | type IV secretion system protein VirB2 | VirB2 | |
| 4 | ACIS_00304 | 275817..278237 [+], 2421 | 269958492 | type IV secretion system protein VirB4 | VirB4 | |
| |
| Region 4: 482159..500712 |
 |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | ACIS_00515 (lipA) | 478613..479554 [+], 942 | 269958659 | lipoyl synthase | | |
| 2 | ACIS_00516 | 479636..479839 [+], 204 | 269958660 | hypothetical protein | | |
| 3 | ACIS_00518 (pstA) | 479836..481083 [-], 1248 | 269958661 | phosphate ABC transporter permease | | |
| 4 | ACIS_00520 (sodB) | 481450..482064 [+], 615 | 269958662 | superoxide dismutase | | |
| 5 | ACIS_00521 (virB3) | 482159..482455 [+], 297 | 269958663 | type IV secretion system protein VirB3 | VirB3 | |
| 6 | ACIS_00522 (virB4) | 482459..484867 [+], 2409 | 269958664 | type IV secretion system protein VirB4 | VirB4 | |
| 7 | ACIS_00523 (virB6) | 484860..487502 [+], 2643 | 269958665 | type IV secretion system protein VirB6 | VirB6 | |
| 8 | ACIS_00524 | 487683..490721 [+], 3039 | 269958666 | type IV secretion system protein | VirB6 | |
| 9 | ACIS_00526 | 490733..494893 [+], 4161 | 269958667 | plasmid conjugal transfer protein | VirB6 | |
| 10 | ACIS_00530 | 494917..500712 [+], 5796 | 269958668 | conjugal transfer protein | VirB6 | |
| 11 | ACIS_00531 | 500727..501344 [-], 618 | 269958669 | hypothetical protein | | |
| 12 | ACIS_00533 (murF) | 501569..502960 [+], 1392 | 269958670 | UDP-N-acetylmuramyl-tripeptide synthetase | | |
| 13 | ACIS_00534 (dut) | 503006..503449 [-], 444 | 269958671 | deoxyuridine 5'triphosphate nucleotidohydrolase | | |
| 14 | ACIS_00535 (ispH) | 503651..504652 [-], 1002 | 269958672 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | | |
| |
| Region 5: 991739..991906 |
 |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | ACIS_00990 (clpX) | 987984..989201 [-], 1218 | 269959004 | ATP-dependent protease ATP-binding subunit | | |
| 2 | ACIS_00991 (clpP) | 989211..989858 [-], 648 | 269959005 | ATP-dependent Clp protease proteolytic subunit | | |
| 3 | ACIS_00992 (tig) | 989863..991188 [-], 1326 | 269959006 | trigger factor | | |
| 4 | ACIS_00993 | 991739..991906 [+], 168 | 269959007 | VirB7 | VirB7 | |
| 5 | ACIS_00994 (pgpA) | 992033..992503 [+], 471 | 269959008 | phosphatidylglycerophosphatase A | | |
| 6 | ACIS_00995 | 992470..993315 [+], 846 | 269959009 | acetyltransferase | | |
| 7 | ACIS_00996 | 993375..994523 [+], 1149 | 269959010 | hypothetical protein | | |
| 8 | ACIS_00997 (rpsD) | 994952..995620 [-], 669 | 269959011 | 30S ribosomal protein S4 | | |
| 9 | ACIS_00998 | 995818..996090 [+], 273 | 269959012 | hypothetical protein | | |
| |
T4SS ID
This T4SS is identified in this study.
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.