 T4SS ID | 389 |
| Strain | Xanthomonas campestris pv. campestris str. ATCC 33913 |
| Replicon | chromosome [Browse all T4SS(s) in this replicon] |
| Accession | NC_003902 |
| Location | 2943358..2954132 |
| Name | VirB |
| Function | effector translocation |
| Classification | Type IVA; Type P |
 This T4SS has been mentioned in a genome sequencing report. | |
T4SS components |
| Component | VirB1 | VirB2 | VirB3 | VirB4 | VirB5 | VirB6 | VirB7 | VirB8 | VirB9 |
| Number | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 |
| Component | VirB10 | VirB11 | VirD4 | ||||||
| Number | 1 | 1 | 1 |
The information of T4SS components from NC_003902 | ||||||
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | XCC2470 | 2939079..2940059 [-], 981 | 21231905 | IS1479 transposase | ||
| 2 | XCC2471 (aglA) | 2940381..2941997 [-], 1617 | 21231906 | alpha-glucosidase | ||
| 3 | XCC2472 | 2942234..2942689 [+], 456 | 21231907 | ISD1 transposase | ||
| 4 | XCC2473 | 2943068..2943211 [+], 144 | 21231908 | ISD1 transposase | ||
| 5 | XCC2474 (virB4) | 2943358..2945811 [-], 2454 | 21231909 | VirB4 protein | VirB4 | |
| 6 | XCC2475 | 2945919..2946230 [-], 312 | 21231910 | VirB3 protein | VirB3 | |
| 7 | XCC2476 (virB2) | 2946223..2946627 [-], 405 | 21231911 | VirB2 protein | VirB2 | |
| 8 | XCC2477 (virB1) | 2946690..2947523 [-], 834 | 21231912 | VirB1 protein | VirB1 | |
| 9 | XCC2478 (virB11) | 2947569..2948627 [-], 1059 | 21231913 | VirB11 protein | VirB11 | |
| 10 | XCC2479 (virB10) | 2948624..2949805 [-], 1182 | 21231914 | VirB10 protein | VirB10 | |
| 11 | XCC2480 (virB9) | 2949802..2950569 [-], 768 | 21231915 | VirB9 protein | VirB9 | |
| 12 | XCC2481 (virB8) | 2950566..2951609 [-], 1044 | 21231916 | VirB8 protein | VirB8 | |
| 13 | XCC2482 | 2951720..2951962 [-], 243 | 21231917 | hypothetical protein | ||
| 14 | XCC2483 (virD4) | 2952459..2954132 [-], 1674 | 21231918 | VirD4 protein | VirD4 | |
| 15 | XCC2485 (uvrB) | 2954983..2957004 [-], 2022 | 21231919 | excinuclease ABC subunit B | ||
| 16 | XCC2486 (fimT) | 2957144..2957695 [+], 552 | 21231920 | fimbrial biogenesis protein | ||
| 17 | XCC2488 (pilE1) | 2957876..2958244 [-], 369 | 21231921 | type IV pilin | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
| (1) da Silva AC; Ferro JA; Reinach FC; Farah CS; Furlan LR; Quaggio RB; Monteiro-Vitorello CB; Van Sluys MA; Almeida NF; Alves LM; do Amaral AM; Bertolini MC; Camargo LE; Camarotte G; Cannavan F; Cardozo J; Chambergo F; Ciapina LP; Cicarelli RM; Coutinho LL; Cursino-Santos JR; El-Dorry H; Faria JB; Ferreira AJ; Ferreira RC; Ferro MI; Formighieri EF; Franco MC; Greggio CC; Gruber A; Katsuyama AM; Kishi LT; Leite RP; Lemos EG; Lemos MV; Locali EC; Machado MA; Madeira AM; Martinez-Rossi NM; Martins EC; Meidanis J; Menck CF; Miyaki CY; Moon DH; Moreira LM; Novo MT; Okura VK; Oliveira MC; Oliveira VR; Pereira HA; Rossi A; Sena JA; Silva C; de Souza RF; Spinola LA; Takita MA; Tamura RE; Teixeira EC; Tezza RI; Trindade dos Santos M; Truffi D; Tsai SM; White FF; Setubal JC; Kitajima JP (2002). Comparison of the genomes of two Xanthomonas pathogens with differing host specificities. Nature. 417(6887):459-63. [PudMed:12024217] |