T4SS ID	327
Strain	Pseudomonas aeruginosa PA7
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_009656
Location	3832621..3844681
Name	Trb
Function	conjugation
Classification	Type IVA; Type P
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	0	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	0	0	1

The information of T4SS components from NC_009656
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	PSPA7_3694 (gltA)	3828215..3829501 [+], 1287	152987195	type II citrate synthase
2	PSPA7_3695	3830088..3832118 [+], 2031	152986523	putative helicase
3	PSPA7_3696	3832400..3832624 [-], 225	152987426	conjugal transfer protein
4	PSPA7_3697	3832621..3833898 [-], 1278	152989341	conjugation TrbI family protein	TrbI
5	PSPA7_3698	3833901..3834893 [-], 993	152983900	conjugal transfer protein TrbG/VirB9/CagX	TrbG
6	PSPA7_3699	3834890..3835594 [-], 705	152985693	conjugal transfer protein TrbF	TrbF
7	PSPA7_3700 (trbL)	3835607..3836992 [-], 1386	152985178	conjugal transfer protein TrbL	TrbL
8	PSPA7_3701	3836989..3837309 [-], 321	152984666	putative lipoprotein
9	PSPA7_3702 (trbJ)	3837322..3838047 [-], 726	152983754	conjugal transfer protein TrbJ	TrbJ
10	PSPA7_3703	3838044..3840497 [-], 2454	152988490	conjugal transfer ATPase TrbE	TrbE
11	PSPA7_3704	3840513..3840785 [-], 273	152987984	conjugal transfer protein
12	PSPA7_3705	3840782..3841165 [-], 384	152987382	conjugal transfer protein TrbC	TrbC
13	PSPA7_3706 (trbB)	3841162..3842214 [-], 1053	152986540	P-type conjugative transfer ATPase TrbB	TrbB
14	PSPA7_3707	3842211..3842675 [-], 465	152984803	CopG/DNA-binding domain-containing protein
15	PSPA7_3708	3842672..3844681 [-], 2010	152984555	conjugal transfer coupling protein TraG	TraG
16	PSPA7_3709	3844916..3845179 [-], 264	152986898	putative lipoprotein
17	PSPA7_3710	3845182..3846120 [-], 939	152989312	LysR family transcriptional regulator
18	PSPA7_3711	3846633..3847340 [+], 708	152985615	hypothetical protein
19	PSPA7_3712 (kdpA1)	3847403..3849130 [+], 1728	152984556	potassium-transporting ATPase subunit A

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICE(Tn4371)6042 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 0.543055556. [PudMed:19941653]

This literature contains bioinformatics investigation