SecReT4

T4SS
References

T4SS ID	261
Strain	Polaromonas naphthalenivorans CJ2
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_008781
Location	2630954..2648630; 2665222..2667751
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	1	1	1

The information of T4SS components from NC_008781
Region 1: 2630954..2648630

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Pnap_2489	2626320..2627306 [-], 987	121605385	oxidoreductase FAD-binding subunit
2	Pnap_2490	2627423..2628379 [+], 957	121605386	LysR family transcriptional regulator
3	Pnap_2491	2628931..2629539 [+], 609	121605387	hypothetical protein
4	Pnap_2492	2629576..2630334 [+], 759	121605388	hypothetical protein
5	Pnap_2493	2630331..2630942 [+], 612	121605389	hypothetical protein
6	Pnap_2494	2630954..2631538 [+], 585	121605390	lytic transglycosylase catalytic subunit	TrbN
7	Pnap_2495	2631468..2632022 [-], 555	121605391	hypothetical protein
8	Pnap_2496	2632055..2632411 [-], 357	121605392	hypothetical protein
9	Pnap_2497	2632633..2633598 [+], 966	121605393	type II secretion system protein E	TrbB
10	Pnap_2498	2633963..2634217 [+], 255	121605394	hypothetical protein
11	Pnap_2499	2634497..2635378 [+], 882	121605395	hypothetical protein
12	Pnap_2500	2635393..2635536 [-], 144	121605396	hypothetical protein
13	Pnap_2501	2635951..2636292 [+], 342	121605397	conjugal transfer protein TrbC	TrbC
14	Pnap_2502	2636319..2636642 [+], 324	121605398	conjugal transfer TrbD family protein	TrbD
15	Pnap_2503	2636646..2639090 [+], 2445	121605399	CagE, TrbE, VirB component of type IV transporter system	TrbE
16	Pnap_2504	2639249..2639950 [+], 702	121605400	conjugal transfer protein TrbJ	TrbJ
17	Pnap_2505	2639965..2641590 [+], 1626	121605401	Type IV secretory pathway TrbL components-like protein	TrbL
18	Pnap_2506	2641600..2643099 [+], 1500	121605402	hypothetical protein
19	Pnap_2507	2643196..2644107 [-], 912	121605403	hypothetical protein
20	Pnap_2508	2644104..2645297 [-], 1194	121605404	hypothetical protein
21	Pnap_2509	2645366..2646019 [+], 654	121605405	conjugal transfer protein	TrbF
22	Pnap_2510	2646379..2647161 [+], 783	121605406	conjugal transfer protein TrbG/VirB9/CagX	TrbG
23	Pnap_2511	2647158..2648630 [+], 1473	121605407	conjugation TrbI family protein	TrbI
24	Pnap_2512	2648780..2649514 [-], 735	121605408	cytochrome c biogenesis protein transmembrane subunit
25	Pnap_2513	2649527..2649907 [-], 381	121605409	thioredoxin domain-containing protein
26	Pnap_2514	2650031..2650564 [+], 534	121605410	hypothetical protein
27	Pnap_2515	2650603..2651211 [+], 609	121605411	TetR family transcriptional regulator
28	Pnap_2516	2651284..2651871 [+], 588	121605412	late embryogenesis abundant protein
29	Pnap_2517	2651981..2652427 [+], 447	121605413	hypothetical protein
30	Pnap_2518	2652625..2653311 [+], 687	121605414	hypothetical protein

Region 2: 2665222..2667751

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Pnap_2525	2660462..2661322 [+], 861	121605420	hypothetical protein
2	Pnap_2526	2661429..2661728 [-], 300	121605421	hypothetical protein
3	Pnap_2527	2661836..2662453 [+], 618	121605422	hypothetical protein
4	Pnap_2528	2662475..2663851 [+], 1377	121605423	hypothetical protein
5	Pnap_2529	2664051..2665205 [+], 1155	121605424	hypothetical protein
6	Pnap_2530	2665222..2667207 [+], 1986	121605425	TRAG family protein	TraG
7	Pnap_2531	2667227..2667751 [+], 525	121605426	conjugal transfer protein TraF	TraF
8	Pnap_2532	2667794..2668369 [-], 576	121605427	hypothetical protein
9	Pnap_2533	2668994..2670973 [-], 1980	121605428	relaxase/mobilization nuclease family protein
10	Pnap_2534	2671629..2671898 [+], 270	121605429	hypothetical protein
11	Pnap_2535	2671898..2672176 [+], 279	121605430	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_008781