SecReT4

T4SS
References

T4SS ID	255
Strain	Sinorhizobium medicae WSM419
Replicon	plasmid pSMED02 [Browse all T4SS(s) in this replicon]
Accession	NC_009621
Location	342561..362264
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	1	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	0	1	1

The information of T4SS components from NC_009621

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Smed_5370	338535..338681 [+], 147	150377478	hypothetical protein
2	Smed_5371	339017..339226 [-], 210	150377479	hypothetical protein
3	Smed_5372	339285..340004 [-], 720	150377480	5-formyltetrahydrofolate cyclo-ligase
4	Smed_5373	340371..341213 [-], 843	150377481	LysR family transcriptional regulator
5	Smed_5375	341930..342550 [+], 621	150377482	putative autoinducer synthesis protein
6	Smed_5376	342561..343538 [+], 978	150377483	conjugal transfer protein TrbB	TrbB
7	Smed_5377	343528..343908 [+], 381	150377484	conjugal transfer protein TrbC	TrbC
8	Smed_5378	343901..344197 [+], 297	150377485	conjugal transfer protein TrbD	TrbD
9	Smed_5379	344208..346661 [+], 2454	150377486	conjugal transfer protein TrbE	TrbE
10	Smed_5380	346636..347436 [+], 801	150377487	conjugal transfer protein TrbJ	TrbJ
11	Smed_5381	347433..347633 [+], 201	150377488	hypothetical protein
12	Smed_5382	347627..348835 [+], 1209	150377489	conjugal transfer protein TrbL	TrbL
13	Smed_5383	348813..349475 [+], 663	150377490	conjugal transfer protein TrbF	TrbF
14	Smed_5384	349492..350304 [+], 813	150377491	conjugal transfer protein TrbG	TrbG
15	Smed_5385	350308..350748 [+], 441	150377492	conjugal transfer protein TrbH	TrbH
16	Smed_5386	350761..352053 [+], 1293	150377493	conjugal transfer protein TrbI	TrbI
17	Smed_5387	352053..353015 [+], 963	150377494	autoinducer-binding domain-containing protein
18	Smed_5388	353019..353342 [-], 324	150377495	conjugal transfer transcriptional regulator (repressor) protein
19	Smed_5389	353561..353773 [+], 213	150377496	XRE family transcriptional regulator
20	Smed_5391	354563..355726 [-], 1164	150377497	conjugal transfer protein TraB
21	Smed_5392	355716..356282 [-], 567	150377498	conjugal transfer pilin processing protease TraF	TraF
22	Smed_5393	356279..359587 [-], 3309	150377499	Dtr system oriT relaxase
23	Smed_5394	359842..360138 [+], 297	150377500	conjugal transfer protein TraC
24	Smed_5395	360143..360358 [+], 216	150377501	conjugal transfer protein TraD
25	Smed_5396	360345..362264 [+], 1920	150377502	conjugal transfer coupling protein TraG	TraG
26	Smed_5397	362653..363564 [-], 912	150377503	hypothetical protein
27	Smed_5398	363688..364155 [+], 468	150377504	WGR domain-containing protein
28	Smed_5399	364442..364753 [-], 312	150377505	hypothetical protein
29	Smed_5402	365939..366163 [+], 225	150377506	XRE family transcriptional regulator

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_009621