| Protein ID: 150377483 |
 T4SS name [ID] | Trb [255] |
| Gene symbol | - |
| Locus tag | Smed_5376 |
| Strain | Sinorhizobium medicae WSM419 |
| Replicon | plasmid pSMED02 [GenBank: NC_009621] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 342561..343538 [+] |
| Product | conjugal transfer protein TrbB |
| Component type | TrbB |
| UniProt ID | A6UKG5 |
| KEGG ID | smd:Smed_5376 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T2SE [PF00437], Evalue: 4.7e-89, Aligned region: 22..288 AAA_19 [PF13245], Evalue: 3.9e-05, Aligned region: 138..184 AAA_16 [PF13191], Evalue: 4.9e-05, Aligned region: 137..264 FtsK_SpoIIIE [PF01580], Evalue: 6.3e-05, Aligned region: 136..194 |
| Protein Sequence: 325 a.a. [Download] |
| >gi|150377483|ref|YP_001314078.1| conjugal transfer protein TrbB [Sinorhizobium medicae WSM419] MTQLRSHPRLVRKLQEALGDQLCVALDDASVVEIMLNPDGKLFIDRLGDGVALAGEMSSAAAEIVVGTVA HALQSEVDREQPIISGELPIGGHRFEGLLPPVVARPAFAIRRRASRLIPLEDYVRTGVMTEDQVSTIRSA ISSRLNIIISGGTGSGKTTLANAVIDEIVKTRPDDRLVILEDTAEIQCAAQNAVLLHTSDKVDMARLLKS TLRLRPDRIVVGEVRDGAALTLLKAWNTGHPGGAATIHSNTAMSALRRLEQLTAEVSQQPMHEVIGEAVD LIVSIERTPRGRRVRDVIRVERFAGGEYEIESDQLTEEQEARHVA |
| Nucleotide Sequence: 978 bp [Download] |
| >gi|150377168|ref|NC_009621.1|:342561-343538 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence GTGACCCAGCTTCGTTCTCACCCCCGACTCGTCCGCAAGCTTCAGGAGGCACTCGGCGATCAGCTCTGCG TCGCCCTGGATGACGCGAGTGTCGTTGAGATCATGCTCAATCCAGACGGAAAGTTGTTCATCGACCGGTT GGGCGACGGTGTTGCGCTTGCCGGGGAAATGTCATCAGCTGCTGCTGAAATTGTTGTCGGTACAGTGGCG CATGCGCTCCAATCCGAGGTCGACAGGGAACAGCCGATCATCTCCGGTGAGTTGCCGATCGGTGGTCACC GTTTCGAGGGGCTCCTTCCCCCGGTCGTGGCAAGGCCTGCCTTTGCGATTCGGCGCCGCGCCTCACGCCT CATCCCCCTCGAAGACTATGTCCGCACCGGGGTGATGACCGAAGATCAAGTCTCGACTATCCGAAGTGCA ATTTCCTCGAGGCTCAACATCATCATCTCCGGAGGGACCGGTTCCGGCAAGACGACGCTTGCAAATGCTG TCATCGACGAGATCGTCAAAACCAGGCCGGATGATCGCCTCGTGATTCTTGAAGATACCGCGGAAATTCA GTGCGCGGCCCAGAACGCCGTTCTTCTACATACCAGTGATAAGGTCGACATGGCGCGGCTCCTTAAGAGC ACCCTGCGCTTGCGTCCCGACAGGATCGTCGTGGGCGAAGTGCGCGACGGCGCGGCCCTAACGCTACTCA AGGCCTGGAACACCGGTCATCCCGGTGGGGCGGCTACGATTCACTCCAACACCGCCATGTCGGCGCTCCG CCGTCTTGAACAGCTGACGGCCGAGGTAAGCCAGCAGCCAATGCACGAGGTTATTGGAGAAGCCGTCGAT CTGATTGTTTCGATCGAGCGCACGCCCCGCGGGCGACGCGTTCGCGACGTCATCCGCGTCGAGCGTTTCG CCGGCGGCGAGTATGAGATCGAATCCGATCAGCTCACGGAAGAACAGGAGGCGCGCCATGTTGCATAA |