T4SS ID140
StrainIncN plasmid R46
Repliconplasmid R46 [Browse all T4SS(s) in this replicon]
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.
structure Information of structure: structureA complex between the VirB9/VirB7 interaction domains

T4SS components

The information of T4SS components from NC_003292
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1R46_001 (tnpA)64..768 [+], 70517530632transposase TnpA 
2R46_002830..1027 [-], 19817530633hypothetical protein 
3R46_0031032..1673 [-], 64217530634hypothetical protein 
4R46_0041729..2040 [-], 31217530584hypothetical protein 
5R46_005 (kikA)2076..2390 [-], 31517530585KikA 
6R46_0062353..2730 [-], 37817530586hypothetical protein 
7R46_007 (korB)2746..3051 [-], 30617530587KorB 
8R46_008 (traL)3160..3894 [+], 73517530588TraL  TrwN
9R46_009 (korA)3903..4184 [+], 28217530589KorA 
10R46_010 (traM)4194..4487 [+], 29417530590TraM  TrwL
11R46_011 (traA)4537..4848 [+], 31217530591TraA  TrwM
12R46_012 (traB)4853..7453 [+], 260117530592TraB  TrwK
13R46_013 (traC)7471..8184 [+], 71417530593TraC  TrwJ
14R46_014 (eex)8192..8419 [+], 22817530594entry exclusion protein 
15R46_015 (traD)8435..9475 [+], 104117530595TraD  TrwI
16R46_016 (traN)9558..9704 [+], 14717530596TraN  TrwH
17R46_017 (traE)9694..10392 [+], 69917530597TraE  TrwG
18R46_018 (traO)10403..11287 [+], 88517530598TraO  TrwF
19R46_019 (traF)11287..12447 [+], 116117530599TraF  TrwE
20R46_020 (traG)12486..13481 [+], 99617530600TraG  TrwD
21R46_021 (nuc)13481..14014 [+], 53417530601endonuclease 
22R46_02214184..14810 [-], 62717530602Fip 
23R46_023 (traI)14810..18046 [-], 323717530603TraI 
24R46_024 (traJ)18046..19575 [-], 153017530604TraJ  TrwB
25R46_025 (traK)19577..19993 [-], 41717530605TraK 
26R46_027 (stbA)20506..20925 [+], 42017530606StbA 
27R46_028 (stbB)20934..21650 [+], 71717530607StdB 
28R46_029 (stbC)21652..22020 [+], 36917530608StbC 
29R46_030 (orfD)22202..22546 [+], 34517530609OrfD 
30R46_031 (ccgAII)22657..22977 [-], 32117530610CcgAII protein 
31R46_032 (ccgAI)23032..23211 [-], 18017530611CcgAI protein 
32R46_033 (ardA)24042..24551 [-], 51017530612ArdA protein 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
The information on structure of this T4ss

1A complex between the VirB9/VirB7 interaction domains2OFQ PDB (2OFQ)NMR Solution Structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system.(1) PubMed: 17244707
(1) Bayliss R; Harris R; Coutte L; Monier A; Fronzes R; Christie PJ; Driscoll PC; Waksman G (2007). NMR structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system. Proc Natl Acad Sci U S A. 104(5):1673-8. [PudMed:17244707] experimental
Identified as part of this study from NC_003292