| Protein ID: 99077929 |
 T4SS name [ID] | VirB [774] |
| Gene symbol | - |
| Locus tag | TM1040_3794 |
| Strain | Ruegeria sp. TM1040 |
| Replicon | plasmid unnamed [GenBank: NC_008042] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 43437..45443 [+] |
| Product | TRAG protein |
| Component type | VirD4 |
| UniProt ID | Q1GN40 |
| KEGG ID | sit:TM1040_3794 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 1.3e-86, Aligned region: 131..540 TraG-D_C [PF12696], Evalue: 1e-28, Aligned region: 390..511 TrwB_AAD_bind [PF10412], Evalue: 2.6e-18, Aligned region: 139..525 AAA_10 [PF12846], Evalue: 1.5e-08, Aligned region: 138..471 |
| Protein Sequence: 668 a.a. [Download] |
| >gi|99077929|ref|YP_611188.1| TRAG protein [Ruegeria sp. TM1040] MSDAMGKARIATGILLVTLVTGAMGYTIASAVLSHQDLGFGAEIDFAYIAQNYLAILDRRPEDAQLIHLI IGSFAAAGLMLSLALSGSALTRFGQTHWQSAREMKANGFFGAPGTGFILGKLGTPKSRAKFVCSKVFPHA LIVAPTGRGKTTGFVIPNLLTWQGSAVTLDVKGECFEATARHRAAQGDKVYRFAPTDWEGKRTHRYNPLL RIYQLKDPARQQMELQLLATLFLQSDNDRVQGLLKGGIDLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQ KEYFARGHEVDNRAAKLIFTRLASTNNDTLTSYVSLLMTSGLDQWQNPAIDEATAVSDFDFRTIRKKPFS VYLVVQPLMVKPLAPLIRLFFSDLLSAMQEKDPGPDEPWPVMIMLDEFNRLGKMPIVVESIETLRSYSGH LAVVTQTIPALDEIYGENTRRALQGNAGVKLYLTPSDEKTVEELSKAVGKTTKTVVTRSQSIGKNPFEGR SQSTRTEESSLLPEDEARRLPLDEIVMVIDAQMPVRAKRIQYFDDRLFKTIHDAQTGDLPFPEPGGAQGK LPLTMRAMPMAPPPDESSGPEADGKAARQTADGQSSGPSGAVPKKTAPIVQAVIAEAQRQMEMDLEGAVA DAEAARIVDEAQMRSAVDGLNDMEAMLQEDRGQKLVGR |
| Nucleotide Sequence: 2007 bp [Download] |
| >gi|99077902|ref|NC_008042.1|:43437-45443 Ruegeria sp. TM1040 plasmid unnamed, complete sequence TTGAGCGACGCCATGGGAAAAGCGCGGATCGCAACTGGGATCTTGCTCGTCACGCTGGTGACCGGGGCCA TGGGATATACCATCGCCTCGGCGGTTCTGAGCCACCAGGATCTCGGCTTCGGGGCGGAGATCGACTTTGC TTATATCGCGCAGAACTATCTGGCGATCCTCGATCGCCGCCCGGAGGACGCGCAACTCATCCACCTGATC ATCGGCAGCTTCGCCGCTGCCGGCCTGATGCTGAGCCTTGCCCTGTCGGGCTCGGCCCTCACACGCTTTG GCCAGACCCATTGGCAGTCTGCGCGCGAGATGAAGGCCAACGGGTTTTTCGGCGCTCCCGGGACCGGGTT CATCCTTGGTAAGCTCGGGACACCAAAATCCCGCGCGAAATTCGTCTGCTCAAAAGTCTTCCCGCACGCG CTGATCGTGGCCCCCACCGGGCGCGGCAAGACCACGGGCTTCGTCATTCCAAACTTGCTGACCTGGCAAG GCTCCGCCGTGACGCTCGATGTGAAGGGGGAATGTTTCGAGGCCACGGCGCGCCACCGCGCCGCCCAGGG CGACAAGGTCTATCGCTTTGCTCCGACGGATTGGGAGGGCAAGCGCACGCATCGCTACAACCCGCTCTTG CGCATCTATCAACTGAAAGATCCCGCGCGCCAACAGATGGAGTTGCAACTTCTTGCTACGCTTTTCTTAC AGAGCGACAACGACCGGGTGCAGGGCCTCCTCAAAGGCGGGATTGATCTCTTTGTGGCAGCAGGCCTGCT GGCGTTCCAGCGCAAGCGTCCGACCTTGGGCGAGATCTACCGCATCGCGGCCTCGGGCGGGAACAAGCAG AAGGAGTATTTCGCGCGGGGCCATGAAGTTGACAACAGGGCGGCCAAGCTGATCTTCACGCGGCTGGCGT CCACCAACAACGATACTCTGACGTCTTATGTTTCACTCCTGATGACCTCAGGGCTTGATCAATGGCAGAA CCCCGCGATCGATGAGGCGACGGCAGTGTCGGATTTCGACTTCCGGACAATCCGCAAAAAGCCCTTCTCT GTTTATCTCGTAGTCCAGCCGCTGATGGTCAAACCACTTGCCCCTCTGATCCGGCTCTTTTTCTCCGATC TCCTTTCGGCGATGCAGGAAAAGGACCCTGGGCCGGATGAGCCGTGGCCTGTGATGATCATGCTCGATGA ATTCAACCGTCTTGGCAAAATGCCTATCGTGGTCGAAAGCATCGAGACCCTCCGCAGCTATAGCGGTCAT CTGGCCGTCGTCACCCAGACGATTCCCGCCCTCGATGAAATCTATGGTGAGAATACCCGCCGAGCCCTGC AGGGCAACGCAGGGGTAAAGCTCTACCTAACCCCGTCTGACGAAAAAACCGTCGAGGAGCTGAGTAAGGC GGTCGGCAAGACCACAAAGACCGTGGTCACGCGGTCGCAATCCATCGGCAAGAACCCCTTCGAGGGCCGC AGCCAATCCACACGGACCGAAGAAAGCTCCTTGCTTCCTGAAGATGAAGCACGCCGCCTGCCACTCGACG AGATCGTCATGGTCATCGATGCCCAAATGCCGGTCCGGGCGAAGCGAATCCAGTATTTTGACGACCGCCT GTTCAAAACGATCCATGATGCACAGACGGGAGACTTGCCGTTTCCAGAGCCGGGGGGCGCGCAGGGTAAG CTGCCACTTACTATGCGCGCGATGCCGATGGCACCGCCACCGGACGAGTCAAGCGGACCCGAGGCCGACG GTAAGGCCGCACGCCAGACTGCTGACGGCCAATCGTCTGGGCCATCTGGCGCTGTTCCCAAGAAGACCGC GCCCATCGTTCAAGCTGTGATCGCCGAGGCGCAGCGACAGATGGAAATGGATCTTGAAGGTGCAGTTGCT GACGCTGAGGCCGCGCGCATCGTTGATGAGGCCCAGATGCGCTCCGCTGTCGATGGTTTGAACGACATGG AAGCTATGCTGCAGGAGGATCGCGGTCAAAAGCTGGTTGGTCGGTAG |