| Protein ID: 88608007 |
 T4SS name [ID] | VirB [504] |
| Gene symbol | virD4 |
| Locus tag | NSE_0739 |
| Strain | Neorickettsia sennetsu str. Miyayama |
| Replicon | chromosome [GenBank: NC_007798] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 658571..660496 [-] |
| Product | type IV secretion system component VirD4 |
| Component type | VirD4 |
| UniProt ID | Q2GD31 |
| KEGG ID | nse:NSE_0739 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 1.4e-143, Aligned region: 120..559 TraG-D_C [PF12696], Evalue: 2.3e-26, Aligned region: 403..525 TrwB_AAD_bind [PF10412], Evalue: 1.3e-23, Aligned region: 234..539 AAA_10 [PF12846], Evalue: 3.4e-05, Aligned region: 356..480 |
| Protein Sequence: 641 a.a. [Download] |
| >gi|88608007|ref|YP_506615.1| type IV secretion system component VirD4 [Neorickettsia sennetsu str. Miyayama] MRQLRNIITIFFLLAFIFALALYMSAAIFVVAVWGIEHLNFRDLQPSLDGFPTRLWPTIFVYISDLFNNW DAWAPAVKIKLAVSLGIPFGILGVVFYMLRAPIMEWRPFKKKESVHGDARWATEREIRKIGLRSRKGILL GKDKKGFLIAGGFQHALLFAPTGSGKGVGFVIPNLLFWEDSVVVHDIKLENFTLTSGYRKKMGQKVYCWS PADPDGKSHCYNPLDWVSSKPGQMVDDVQKIANLLMPEQDFWVNEARSLFLGVVLYILAVPEKVKSFGEV VRVMRSDDVTYSLAVALDTMGKKIHPVAYMNIAAFLQKADKERSGVISTMNSSLELWANPLIDTTTATSD FNFMKFKRELTTVYVGLTPDNLTRLQPLMQVFYQQATEFLCRHLPQKDEPYGVLFMMDEFPTLGEMEQFK TGIAYFRGYNVRLFLIIQDTEQLKGIYEEAGMNSFLSNSTYRITFAANNIETANLISQLVGNKTVAQESL NKPKFLDLNPASRSLHISETQRALLLPQEVIMLPRDQQILLIESTYPIKSKKIRYFEDSFFTKKILDPIS IPTQEPFDPKKFEEKMRKEREAKELEENAPLAIDEDQALLEDESLLDDSDYEDGDFEDLDEEEDLSDFLD DTDEENEENMV |
| Nucleotide Sequence: 1926 bp [Download] |
| >gi|88607955|ref|NC_007798.1|:c660496-658571 Neorickettsia sennetsu str. Miyayama chromosome, complete genome ATGAGACAGCTTAGGAATATTATAACGATATTTTTTCTTCTGGCGTTCATTTTTGCCTTGGCCCTTTACA TGTCAGCGGCTATTTTTGTGGTTGCAGTTTGGGGAATAGAACACCTCAATTTCCGTGATTTGCAACCATC TTTGGACGGGTTTCCTACACGTCTTTGGCCTACAATTTTTGTCTATATAAGTGATCTTTTCAATAATTGG GATGCTTGGGCCCCAGCTGTAAAGATAAAACTTGCTGTCTCGTTAGGCATTCCGTTTGGAATACTCGGAG TCGTTTTTTATATGCTCCGTGCACCGATTATGGAGTGGCGCCCATTCAAGAAGAAAGAATCTGTGCACGG TGATGCAAGGTGGGCAACAGAAAGGGAAATAAGGAAAATCGGGCTTAGAAGTCGTAAAGGGATACTGCTT GGTAAAGATAAGAAAGGTTTCCTCATTGCAGGGGGGTTTCAACACGCTTTACTGTTCGCTCCAACTGGTT CTGGGAAGGGTGTTGGGTTTGTTATCCCAAATCTTCTCTTCTGGGAAGATTCTGTTGTTGTTCACGATAT CAAACTTGAGAACTTCACCTTAACTAGCGGTTATAGGAAAAAGATGGGTCAGAAGGTCTATTGTTGGAGT CCAGCTGATCCAGATGGTAAAAGTCACTGCTATAATCCGTTGGATTGGGTTAGTTCAAAGCCGGGGCAGA TGGTAGATGATGTTCAGAAAATCGCTAACCTCCTAATGCCCGAACAAGATTTCTGGGTCAATGAAGCCCG AAGTCTTTTTCTGGGGGTAGTACTGTACATTCTTGCGGTACCAGAAAAGGTAAAGTCCTTTGGAGAGGTG GTAAGGGTGATGAGAAGCGATGATGTTACGTATAGTCTCGCTGTTGCGTTAGATACAATGGGTAAAAAGA TTCACCCAGTTGCCTATATGAACATTGCTGCTTTTCTTCAAAAGGCAGACAAAGAAAGATCTGGTGTGAT ATCGACAATGAACTCCTCGCTCGAATTATGGGCAAACCCACTTATTGATACCACGACGGCTACTAGTGAC TTTAATTTTATGAAGTTCAAAAGAGAACTTACGACGGTGTATGTGGGCCTCACACCAGACAACTTGACGA GATTACAGCCGCTTATGCAGGTTTTTTATCAACAAGCAACAGAGTTTTTGTGTAGGCATCTTCCACAAAA AGACGAACCATATGGTGTTTTGTTTATGATGGACGAGTTTCCTACCCTTGGTGAGATGGAGCAGTTTAAA ACTGGTATTGCATATTTTCGTGGATATAACGTACGTCTGTTTCTTATCATCCAAGATACAGAGCAGCTAA AAGGTATCTACGAGGAAGCAGGGATGAACTCTTTTCTCTCGAACTCTACCTACAGAATTACTTTTGCTGC AAACAACATAGAAACGGCAAATTTAATTTCGCAGTTGGTTGGTAATAAGACAGTTGCACAGGAATCGCTT AACAAACCGAAGTTTCTTGACTTGAATCCTGCATCGAGGTCGCTGCATATTTCCGAGACTCAGCGTGCGC TTCTGTTGCCTCAGGAGGTGATAATGTTGCCGCGTGACCAGCAGATCCTATTGATTGAATCTACTTATCC TATCAAATCAAAAAAGATACGGTATTTCGAAGATAGTTTTTTCACGAAAAAAATCCTCGATCCTATTTCT ATCCCGACCCAGGAACCATTTGATCCCAAAAAATTTGAAGAAAAGATGCGTAAGGAAAGGGAGGCTAAGG AATTAGAAGAGAATGCTCCATTGGCTATAGATGAAGATCAAGCGCTTCTTGAAGACGAGTCTCTTTTGGA TGATTCCGATTATGAAGATGGAGACTTTGAGGATCTAGATGAAGAAGAGGATCTGTCCGATTTTTTAGAT GACACGGACGAAGAGAACGAAGAAAACATGGTATGA |