| Protein ID: 41223312 |
 T4SS name [ID] | VirB [19] |
| Gene symbol | virD4 |
| Locus tag | Atu6184 |
| Strain | Agrobacterium tumefaciens str. C58 |
| Replicon | plasmid Ti [GenBank: NC_003065] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 199956..201962 [+] |
| Product | type IV secretion system protein VirD4 |
| Component type | VirD4 |
| UniProt ID | P18594 |
| KEGG ID | atu:Atu6184 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 1.6e-160, Aligned region: 97..537 TraG-D_C [PF12696], Evalue: 5.7e-28, Aligned region: 391..509 TrwB_AAD_bind [PF10412], Evalue: 6.7e-24, Aligned region: 138..522 AAA_10 [PF12846], Evalue: 1.2e-07, Aligned region: 140..467 |
| Protein Sequence: 668 a.a. [Download] |
| >gi|41223312|ref|NP_396505.2| virA/G regulated protein [Agrobacterium tumefaciens str. C58] MNSSKTTPQRLAVSIVCSLAAGFCAASLYVTFRHGFNGEAMMTFSVFAFWYETPLYMGHATPVFYCGLAI VVSTSIVVLLSQLIISFRNHEHHGTARWAGFGEMRHAGYLQRYNRIKGPIFGKTCGPRWFGSYLTNGEQP HSLVVAPTRAGKGVGVVIPTLLTFKGSVIALDVKGELFELTSRARKAGGDAVFKFSPLDPERRTHCYNPV LDIAALPPERQFTETRRLAANLITAKGKGAEGFIDGARDLFVAGILTCIERGTPTIGAVYDLFAQPGEKY KLFAHLAEESRNKEAQRIFDNMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSVYDLRRKRTC VYLCVSPNDLEVVAPLMRLLFQQVVSILQRSLPGKDERHEVLFLLDEFKHLGKLEAIETAITTIAGYKGR FMFIIQSLSALTGIYDDAGKQNFLSNTGVQVFMATADDETPTYISKAIGDYTFKARSTSYSQARMFDHNI QISDQGAPLLRPEQVRLLDDNNEIVLIKGHPPLKLRKVRYYSDRMLRRLFECQIGALPEPASLMLSEGVH RDGQDLSQQAAVTEAQGLGDIDSIPNNMEAATPQNSEMDDEQDSLPTGIDVPQGLIESDEVKEDAGGVVP DFGVSAEMAPAMIAQQQLLEQIIALQQRYGPASSHSVK |
| Nucleotide Sequence: 2007 bp [Download] |
| >gi|159161952|ref|NC_003065.3|:199956-201962 Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence ATGAATTCGAGCAAGACTACGCCCCAGCGTTTAGCTGTCAGCATCGTATGTTCGCTGGCAGCCGGTTTTT GCGCGGCAAGTCTCTATGTAACATTTCGCCATGGTTTCAATGGCGAAGCGATGATGACGTTTAGCGTCTT CGCCTTTTGGTACGAGACCCCGCTCTATATGGGTCATGCGACCCCCGTCTTCTATTGCGGTTTAGCCATT GTCGTCTCGACGTCTATTGTTGTGCTGTTAAGCCAACTTATCATATCGTTTCGCAATCACGAGCATCATG GCACGGCTCGTTGGGCGGGATTTGGCGAAATGCGGCACGCCGGTTACCTGCAGCGCTATAATCGTATCAA GGGGCCAATCTTTGGCAAGACGTGTGGCCCTCGTTGGTTCGGCAGCTATCTGACCAATGGCGAACAGCCT CACAGTCTTGTTGTCGCGCCAACGCGCGCCGGCAAAGGCGTTGGCGTCGTTATTCCGACGCTCCTAACCT TCAAGGGTTCGGTGATAGCCCTCGACGTCAAAGGCGAGCTTTTTGAGCTGACTTCCAGAGCACGCAAAGC GGGCGGCGACGCCGTTTTCAAGTTCTCGCCTCTGGATCCAGAGCGACGGACTCATTGTTACAATCCCGTC CTCGATATTGCAGCTTTACCGCCCGAGCGGCAGTTTACCGAGACGCGCCGCCTCGCCGCAAACCTCATCA CGGCCAAAGGCAAGGGAGCGGAAGGCTTTATCGACGGCGCGCGGGACCTTTTCGTTGCGGGCATCCTTAC CTGTATTGAGCGCGGTACGCCAACAATTGGTGCGGTCTACGACTTATTTGCTCAACCTGGAGAGAAGTAC AAACTTTTTGCGCACCTCGCGGAAGAAAGCCGAAATAAAGAGGCTCAGCGCATTTTCGACAATATGGCGG GTAACGACACGAAAATTTTGACTTCTTATACATCAGTGCTCGGCGACGGCGGACTTAACCTGTGGGCTGA TCCATTGGTTAAAGCAGCGACAAGTCGATCAGATTTTTCCGTCTATGATCTGCGTCGGAAGAGGACCTGC GTCTATCTTTGCGTCAGTCCCAACGACCTCGAGGTCGTGGCGCCATTGATGCGCCTCCTTTTTCAGCAGG TCGTGTCAATTCTGCAGCGATCACTGCCAGGTAAAGATGAGCGGCATGAAGTTTTGTTTCTCCTTGACGA ATTTAAACACCTGGGGAAGCTTGAGGCAATCGAGACCGCGATTACAACCATCGCCGGTTACAAAGGCCGC TTCATGTTTATTATTCAGAGTCTCTCGGCCTTGACGGGCATCTACGATGACGCGGGCAAACAAAACTTTC TCAGTAACACTGGCGTGCAAGTATTTATGGCCACGGCCGACGACGAAACACCGACCTATATCTCAAAAGC TATCGGCGACTATACGTTCAAGGCGCGTTCGACCTCATACAGTCAAGCCCGAATGTTCGATCATAACATC CAGATTTCCGATCAGGGGGCACCGCTTTTGCGCCCCGAACAAGTGCGCTTGCTTGACGATAACAATGAAA TCGTCCTTATTAAAGGGCATCCGCCTCTCAAACTACGAAAGGTGCGATATTATTCCGATCGTATGCTGAG GCGCCTTTTCGAATGCCAAATTGGCGCCCTCCCTGAGCCCGCATCTTTGATGCTTTCGGAAGGTGTCCAT CGGGATGGGCAAGACCTCAGTCAACAAGCCGCCGTCACGGAGGCGCAGGGCTTAGGTGACATCGATTCGA TACCTAATAATATGGAAGCCGCTACACCGCAAAACAGTGAAATGGATGACGAGCAGGACAGCCTCCCAAC TGGAATTGACGTCCCCCAGGGCCTTATTGAAAGCGATGAGGTGAAAGAAGACGCCGGTGGCGTGGTGCCA GATTTCGGTGTTTCAGCTGAAATGGCTCCAGCTATGATTGCACAACAGCAGCTGCTGGAGCAGATCATTG CGCTTCAGCAACGATATGGACCCGCGTCCTCGCACTCGGTGAAATGA |