| Protein ID: 298736034 |
 T4SS name [ID] | VirB [609] |
| Gene symbol | virD4 |
| Locus tag | HPB8_538 |
| Strain | Helicobacter pylori B8 |
| Replicon | chromosome [GenBank: NC_014256] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 510833..512962 [-] |
| Product | type IV secretion system protein VirD4 |
| Component type | VirD4 |
| UniProt ID | D7FD38 |
| KEGG ID | hpl:HPB8_538 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 3e-65, Aligned region: 95..612 TraG-D_C [PF12696], Evalue: 2.9e-22, Aligned region: 458..578 TrwB_AAD_bind [PF10412], Evalue: 2.8e-20, Aligned region: 420..594 AAA_10 [PF12846], Evalue: 1.9e-05, Aligned region: 148..532 |
| Protein Sequence: 709 a.a. [Download] |
| >gi|298736034|ref|YP_003728559.1| type IV secretion system protein VirD4 [Helicobacter pylori B8] MKMQFVKAFCVLFSILLIPLFFILANYYTFDALKSLRQAYFFSQSVFVGLYHGASIFDLKFEVYLTMLIS LMPFVATIYINFPKTTETSHGYARWANVKDIECFKIFSKEGFCKVVHRLGVQFDNGFILGKFGFPKLRNV CYDKPLGAMIVAPPGAGKTACVALPNLLTLPNSCIITDIKGELRDKTAGYRQKFLNNRILIFNPYGDDNT CYFNPFDKRIVEKMTFAEQLRHVKAVGDGIFVDEEDHWVSKAKELFVFFALLQVVTKGHSSFYDVSIAPA NDYAPLIHPKSPYYKQLYQHDKKTGEVILDPQTNAPMKNPQANVLKLFLNQVADQKYIDMNDEKNYDPRE PEPPYGTKGALDEIIRTDARSWANTPDDEFGSIMSSFKRFMYVYKDPKVREATSKMSFDYEELRTGNISI YIVIAQIDIGTLSSLVRAFLESIAKNLMVKESSKPEERIFIIADEFVRFGKLPFLLEMPALCRSYNVVPL FITQDYAMIRKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVGEFTRQSKNYSTEKGQLVFGGSSS YSHEGRNLLTAQDIMNINSDEVIVIVTGAKATPLKLKANYWFKDKELLKRANLPIDLEVERQRVEEPIQP TTPQELENSNLKESEKDNESPITLENANENIEQGNHNEIDEILKKPLSEISMEEKRALFKKMQQGDEESE QEVTQSTQS |
| Nucleotide Sequence: 2130 bp [Download] |
| >gi|298735500|ref|NC_014256.1|:c512962-510833 Helicobacter pylori B8 chromosome, complete genome ATGAAAATGCAATTTGTGAAGGCTTTTTGCGTGCTTTTTAGCATTTTACTTATCCCCTTATTTTTTATCT TGGCAAATTATTACACTTTTGATGCCTTAAAGTCGTTGAGACAGGCTTATTTCTTTTCTCAAAGCGTGTT TGTAGGGCTTTATCATGGGGCAAGCATCTTTGATTTAAAATTTGAAGTCTATCTTACTATGCTAATCTCT TTAATGCCCTTTGTGGCTACGATTTATATCAATTTCCCAAAAACCACAGAAACTTCGCATGGCTATGCGA GATGGGCTAATGTTAAAGATATAGAATGCTTTAAAATTTTTAGCAAAGAGGGCTTTTGTAAAGTGGTGCA TAGATTAGGGGTGCAATTTGATAATGGCTTTATTCTAGGTAAATTTGGTTTTCCAAAGCTTAGAAATGTG TGCTATGACAAGCCCTTAGGAGCGATGATTGTTGCGCCCCCTGGTGCTGGAAAAACTGCATGTGTGGCTT TGCCAAATTTATTGACTTTGCCTAATAGCTGTATTATCACTGATATTAAAGGCGAACTAAGAGATAAGAC CGCAGGTTATAGACAAAAATTCTTAAACAATAGAATTTTAATTTTTAATCCTTATGGTGATGATAACACT TGCTATTTCAATCCTTTTGATAAAAGGATTGTTGAAAAGATGACCTTTGCGGAGCAATTAAGGCATGTTA AAGCAGTAGGCGATGGTATTTTTGTAGATGAAGAAGACCATTGGGTATCTAAAGCTAAAGAGCTTTTTGT CTTTTTTGCTCTTTTACAAGTAGTAACCAAAGGGCATAGCTCTTTTTATGATGTCTCTATCGCACCAGCT AATGATTATGCCCCCTTAATACACCCTAAAAGCCCTTATTACAAGCAACTTTACCAACACGATAAAAAGA CAGGCGAAGTTATCTTAGACCCACAAACTAACGCCCCCATGAAAAATCCCCAAGCTAATGTTTTAAAACT CTTTTTAAATCAAGTGGCTGACCAAAAATACATAGATATGAATGATGAAAAAAACTATGACCCAAGAGAA CCTGAACCCCCTTATGGAACAAAAGGGGCGTTAGATGAGATTATAAGGACAGATGCTAGGAGTTGGGCAA ACACTCCTGATGATGAATTTGGGAGCATTATGTCTTCTTTTAAGCGTTTTATGTATGTCTATAAAGACCC AAAAGTGCGTGAAGCTACTTCTAAAATGAGCTTTGATTATGAAGAATTAAGAACGGGCAATATCAGTATT TACATTGTAATCGCTCAAATTGATATAGGCACACTTTCTTCTTTAGTAAGAGCCTTTTTAGAGAGTATTG CTAAAAACCTTATGGTCAAAGAAAGCTCTAAACCTGAAGAGCGTATTTTTATCATTGCTGATGAATTTGT TAGATTTGGTAAGTTGCCTTTCTTGTTAGAAATGCCAGCACTTTGTCGCTCTTATAATGTTGTCCCCTTA TTCATCACGCAAGATTATGCGATGATTAGAAAATACTATAGCGATGATGATTTGAAAATCTTAAAAGGCG TGGTGCATTATAACATTGTCTTTAAGATGAATAGTGCTGAAGATGCTGAGATTGTCTCTAAGGAAGTGGG CGAATTTACAAGACAATCTAAAAATTATTCTACCGAAAAAGGTCAATTGGTCTTTGGAGGTAGCTCTTCT TATAGCCATGAGGGTAGAAACTTACTCACAGCCCAAGATATTATGAATATCAATTCAGATGAAGTCATTG TTATTGTTACAGGGGCTAAAGCTACCCCCTTAAAACTCAAAGCTAATTATTGGTTCAAAGATAAAGAGCT TTTAAAAAGAGCTAATTTGCCTATTGATTTAGAAGTAGAGAGACAAAGAGTTGAAGAGCCTATACAACCC ACTACACCACAAGAGCTTGAAAATTCAAACTTAAAAGAAAGCGAGAAAGACAATGAAAGTCCCATTACCT TAGAAAATGCTAATGAAAATATAGAGCAAGGAAATCACAATGAAATTGATGAGATTTTAAAAAAGCCACT GAGTGAAATCAGTATGGAAGAGAAAAGAGCCTTGTTTAAGAAAATGCAACAAGGCGATGAAGAAAGCGAA CAAGAAGTTACACAAAGCACCCAAAGTTAA |