| Protein ID: 28558899 |
 T4SS name [ID] | VirB [454] |
| Gene symbol | - |
| Locus tag | rc172 |
| Strain | Ruegeria sp. PR1b plasmid pSD25 (NC_004574) |
| Replicon | plasmid pSD25 [GenBank: NC_004574] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 82508..84508 [-] |
| Product | RC172 |
| Component type | VirD4 |
| UniProt ID | Q8KW18 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 2.1e-86, Aligned region: 127..541 TraG-D_C [PF12696], Evalue: 4.2e-28, Aligned region: 386..507 TrwB_AAD_bind [PF10412], Evalue: 1.4e-17, Aligned region: 135..521 AAA_10 [PF12846], Evalue: 2e-08, Aligned region: 134..467 |
| Protein Sequence: 666 a.a. [Download] |
| >gi|28558899|ref|NP_788159.1| RC172 [Ruegeria sp. PR1b] MGKARIATGVLLVTLVTGAIGYTIASAVLTYQDLGFGAKIDFAYIAQNYLAILDRRPEDAQLIHLIIGSF AAAGLMLSLALSGSALTRFGQTHWQSAREMKANGFFGAPGTGFILGKLGPPGSRANYICSKVFPHALIVA PTGRGKTTGFVIPNLLTWQGSAVTLDVKGECFEATARHRAAQGDKVYRFAPTDWEGKRTHRYNPLLRIFE LKDPARQQMELQLLATLFLQSDNDRVQGLLKGGIDLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQKEYF ARGHEVDNRAAKLIFTRLASTNNDTLTSYVSLLMTSGLDQWQNPAIDEATAVSDFDFRTIRKKPFSVYLV VQPLMVKPLAPLIRLFFSDLLSAMQEKDPGPDEPWPVMIMLDEFNRLGKMPIVVESIETLRTYRGHLAVV TQTIPALDEIYGENTRRALQGNAGVKLYLTPSDEKTVEELSKAVGKTTKTVITRSQSIGKNPFEGRSQST RTEESSLLPEDEARRLPLDEIVMVIDAQMPVRAKRIQYFDDRLFKAIHAAQTGELPFPKPGGGRAQGDLP LSVRAMPMTPPANGSGGPEADLEAARRAADGQSSGQTDVTPKKTAPVVQAVIAEEQRQMEMDFGSSVVDS EAASVADEAQMRSAVDGLDDMEAMLREEDGERLVAR |
| Nucleotide Sequence: 2001 bp [Download] |
| >gi|28558826|ref|NC_004574.1|:c84508-82508 Ruegeria sp. PR1b plasmid pSD25, complete sequence ATGGGAAAGGCGCGGATCGCCACAGGGGTCTTGCTGGTAACGCTGGTGACCGGTGCGATAGGCTACACCA TCGCCTCGGCGGTGCTGACCTACCAGGATCTCGGCTTCGGGGCCAAGATCGACTTCGCCTATATCGCGCA AAACTATCTGGCGATCCTGGACCGCCGCCCGGAGGACGCCCAACTTATTCACTTGATCATCGGCAGCTTC GCCGCCGCCGGCCTGATGCTGAGCCTCGCCCTCTCAGGATCGGCGCTCACACGCTTTGGCCAGACCCATT GGCAGAGTGCGCGCGAGATGAAGGCCAACGGGTTCTTCGGGGCGCCGGGCACCGGGTTCATCCTCGGTAA GCTCGGGCCGCCGGGCTCCCGCGCCAATTACATCTGCTCGAAAGTTTTCCCCCATGCGCTGATTGTGGCG CCCACGGGCCGCGGCAAGACCACGGGCTTTGTCATTCCGAACCTGCTGACCTGGCAAGGCTCCGCCGTGA CGCTCGATGTGAAGGGGGAATGTTTCGAAGCCACGGCCCGTCACCGCGCCGCCCAAGGCGACAAGGTTTA CCGCTTTGCCCCCACCGATTGGGAGGGCAAGCGCACGCATCGCTACAACCCGCTCTTGCGCATCTTCGAA CTGAAAGATCCCGCGCGCCAGCAGATGGAATTGCAGCTTCTCGCGACGCTCTTCTTGCAGAGCGACAACG ATCGGGTGCAGGGCCTCCTCAAAGGCGGGATCGATCTTTTCGTCGCGGCGGGGCTTTTGGCGTTCCAGCG CAAGCGCCCCACCCTTGGTGAAATCTACCGCATCGCCGCTTCGGGCGGGAACAAGCAGAAGGAATATTTC GCGCGGGGCCATGAGGTCGACAACAGGGCGGCCAAGTTGATCTTCACGCGGCTCGCCTCGACCAACAACG ACACGCTGACGTCTTACGTTTCGCTCCTGATGACCTCGGGGCTTGACCAATGGCAGAACCCGGCGATCGA TGAGGCGACAGCGGTCTCGGACTTTGATTTCCGTACGATCCGCAAGAAGCCCTTCTCGGTCTACCTCGTC GTCCAGCCGCTGATGGTGAAGCCGCTGGCGCCGCTGATCCGGCTCTTTTTCTCCGATCTCCTTTCCGCCA TGCAGGAAAAGGATCCCGGGCCGGATGAGCCGTGGCCGGTGATGATCATGCTCGACGAGTTCAACCGTTT GGGAAAGATGCCCATCGTGGTCGAGAGCATCGAGACACTGCGGACCTATCGCGGTCACCTGGCCGTGGTC ACCCAAACCATCCCCGCCCTCGACGAAATCTATGGTGAGAACACTCGGCGCGCCCTGCAGGGCAATGCCG GCGTGAAGCTCTACCTGACGCCCTCGGATGAGAAAACGGTCGAGGAGCTCAGCAAGGCTGTCGGCAAGAC TACGAAAACCGTCATCACGCGATCCCAGTCCATCGGCAAGAACCCCTTCGAGGGCCGCAGCCAATCCACA CGGACCGAAGAAAGTTCCTTGCTGCCTGAAGATGAGGCGCGCCGTCTGCCGCTCGACGAGATCGTCATGG TGATCGATGCACAAATGCCGGTTCGGGCCAAACGGATTCAGTATTTTGACGACCGGCTCTTCAAGGCGAT CCATGCGGCACAAACGGGCGAGTTGCCGTTTCCGAAGCCGGGGGGAGGGAGAGCACAAGGTGATTTGCCG CTGAGTGTGCGCGCCATGCCGATGACTCCGCCAGCGAACGGGTCAGGCGGACCCGAGGCCGACCTTGAGG CCGCACGCCGGGCTGCTGATGGCCAATCGTCAGGGCAAACCGATGTCACCCCAAAGAAGACTGCGCCTGT CGTTCAAGCCGTTATCGCAGAGGAACAGCGACAGATGGAGATGGATTTTGGCAGCAGCGTTGTGGATTCT GAAGCTGCGAGCGTAGCTGATGAGGCGCAGATGCGCTCTGCAGTCGATGGCTTGGACGACATGGAAGCGA TGCTGCGAGAGGAGGATGGTGAAAGGCTGGTTGCGCGATAG |