| Protein ID: 238650740 |
 T4SS name [ID] | VirB [478] |
| Gene symbol | - |
| Locus tag | RPR_04275 |
| Strain | Rickettsia peacockii str. Rustic |
| Replicon | chromosome [GenBank: NC_012730] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 726899..728674 [+] |
| Product | type IV secretion system component VirD4 |
| Component type | VirD4 |
| UniProt ID | C4K1U4 |
| KEGG ID | rpk:RPR_04275 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 1.4e-165, Aligned region: 120..567 TraG-D_C [PF12696], Evalue: 8.9e-28, Aligned region: 404..526 TrwB_AAD_bind [PF10412], Evalue: 1.3e-21, Aligned region: 237..535 AAA_10 [PF12846], Evalue: 2.6e-05, Aligned region: 155..481 |
| Protein Sequence: 591 a.a. [Download] |
| >gi|238650740|ref|YP_002916593.1| type IV secretion system component VirD4 [Rickettsia peacockii str. Rustic] MEWHKILKVTRNIFGHAIIHPVVIFCTIWISGAFVAIFTNEVGALGVNINAINIAYKWAYWLINVWGQLK IADYNYLKLKLLASLLSPAIIVIIFYIKNFERIKSLQFFKQDEKVYGDASWANPSDIEAAGLRSKKGMLI GVDAGGYFVADGFQHALLFAPTGSGKGVGFVIPNLLFWSDSVVVHDIKLENHGLTSGWREKQGQKVFVWE PSNPDGVTHCYNPIDWVSTKPGQMVDDVQKISNLIMPEKDFWNNEARSLFLGVTLYLIADPTKTKSFGEV VRTMRSDDVVYNLAVVLDTLGGVIHPVAYMNIAAFLQKADKERSGVISTMNSSLELWANPLIDSATASSD FNIQEFKKVKTTVYVGLTPDNIQRLQKLMQVFYQQATEFLSRKMPDLKEEPYGVMFLLDEFPTLGKMDTF KAGIAYFRGYRVRLFLIIQDTQQLKGTYEDAGMNSFLSNATYRITFAANNYETANLISQLVGNKTVEQRS FSKPLFFDLNIATRTQNVSQVQRALLLPQEVIQLPRDEQIVLIESFPPIKSRKIKYYEDKFFTSRLLPPT FVPTQVPFDPRANNNEASEETKTITVPENNE |
| Nucleotide Sequence: 1776 bp [Download] |
| >gi|238650213|ref|NC_012730.1|:726899-728674 Rickettsia peacockii str. Rustic, complete genome ATGGAATGGCATAAGATACTTAAAGTTACTAGAAATATATTCGGTCATGCTATAATTCATCCGGTTGTTA TTTTTTGTACCATTTGGATAAGCGGTGCATTTGTTGCAATTTTTACTAATGAGGTTGGAGCTTTAGGTGT AAATATAAATGCTATAAATATTGCTTATAAGTGGGCTTATTGGCTTATTAACGTTTGGGGGCAGTTAAAA ATTGCCGACTATAATTATTTAAAATTGAAGCTACTTGCCTCTCTTCTCAGTCCGGCTATTATTGTTATAA TATTTTACATTAAAAATTTTGAAAGAATAAAATCATTACAATTTTTCAAACAAGATGAAAAAGTATATGG AGATGCAAGCTGGGCTAATCCGTCAGATATAGAGGCTGCAGGTCTTAGATCTAAGAAAGGTATGCTGATC GGTGTTGATGCCGGTGGATATTTTGTTGCAGACGGGTTCCAGCATGCTTTATTATTTGCTCCTACCGGTT CAGGTAAAGGTGTAGGGTTTGTGATACCTAACTTGTTATTTTGGAGTGATTCGGTAGTAGTGCATGACAT AAAGCTTGAAAATCACGGGTTGACAAGTGGTTGGCGTGAGAAGCAAGGGCAGAAAGTTTTTGTATGGGAG CCTTCTAATCCTGATGGTGTTACTCATTGTTATAATCCGATTGATTGGGTTAGTACTAAGCCTGGGCAAA TGGTTGATGACGTTCAAAAAATTTCAAATCTTATAATGCCGGAAAAGGATTTTTGGAATAATGAGGCACG AAGCTTATTTTTAGGCGTAACTCTATATTTAATAGCCGATCCTACTAAAACTAAATCTTTCGGTGAAGTA GTGCGTACTATGAGGAGTGACGACGTAGTTTATAATCTAGCGGTCGTACTCGATACGCTTGGTGGTGTAA TACATCCTGTTGCATATATGAATATTGCTGCATTTTTGCAAAAAGCCGATAAAGAGCGTTCCGGCGTAAT ATCTACAATGAACTCATCGCTTGAATTATGGGCAAATCCACTTATTGATTCAGCTACAGCATCTTCTGAT TTCAATATACAAGAATTTAAAAAAGTCAAAACAACCGTATATGTAGGGTTAACACCCGATAATATACAGC GTTTACAAAAATTAATGCAGGTGTTTTATCAGCAGGCGACAGAATTTTTAAGCCGCAAAATGCCGGATTT AAAGGAAGAGCCGTATGGAGTAATGTTCTTACTTGACGAGTTCCCAACGCTCGGGAAGATGGATACTTTT AAAGCCGGTATAGCTTATTTTAGAGGTTATAGAGTTCGTTTATTTTTAATTATCCAAGATACACAGCAGT TAAAAGGAACATATGAAGATGCCGGGATGAATTCTTTCTTATCTAATGCAACATATCGTATTACTTTTGC CGCTAATAACTATGAAACGGCAAATTTAATATCGCAGCTTGTCGGTAATAAGACGGTAGAACAAAGATCA TTTAGTAAACCTTTATTTTTTGATCTTAATATTGCTACTAGAACCCAAAACGTTTCTCAGGTTCAAAGAG CTTTACTTTTACCTCAAGAAGTAATACAGCTACCGAGAGATGAGCAAATTGTTTTAATAGAATCCTTTCC GCCTATAAAATCGCGTAAAATTAAGTATTATGAAGATAAGTTTTTTACTAGTAGATTATTACCGCCGACT TTTGTACCTACTCAAGTACCTTTTGACCCTAGGGCAAATAATAATGAGGCTTCGGAAGAGACCAAAACAA TAACTGTTCCGGAAAATAATGAGTAA |