| Protein ID: 222080232 |
 T4SS name [ID] | VirB [14] |
| Gene symbol | virD4 |
| Locus tag | Avi_8210 |
| Strain | Agrobacterium vitis S4 |
| Replicon | plasmid pTiS4 [GenBank: NC_011982] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 150781..152772 [-] |
| Product | type IV secretion system protein VirD4 |
| Component type | VirD4 |
| UniProt ID | B9K401 |
| KEGG ID | avi:Avi_8210 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 2.9e-156, Aligned region: 98..542 TraG-D_C [PF12696], Evalue: 1.4e-27, Aligned region: 392..510 TrwB_AAD_bind [PF10412], Evalue: 2.6e-24, Aligned region: 139..523 AAA_10 [PF12846], Evalue: 1.1e-07, Aligned region: 141..468 |
| Protein Sequence: 663 a.a. [Download] |
| >gi|222080232|ref|YP_002540095.1| virA/G regulated protein [Agrobacterium vitis S4] MMNSGKYTPIGLAAIIACSLAVGFCAASLYVTFRHGFTGEKMMTFSVFTFLYETPPYLGYASPTFYRGLA IIVVTSTVVLLGQLLLSMRDRQHHGTARWAGSSEMRHAKYLQRYSHVTGPIFGKTCGPRWFGSYLSNGEQ PHSLVVAPTRAGKGVGVVIPTLLTFKGSVIALDVKGELFELTSRARRSSGDAVFKFSPLDPERRTHCYNP VLDIAALPAERRFTETRRLAANLITAKGKGAEGFIDGARDLFVAGILSCIERGTPTIGAVYDLFAQPGEK YKLFAQLAEETQNKEAQRIFDNMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSVYDLRRKKT CIYLCVSPNDLEVVAPLMRLLFQQVVSILQRSLPLGDERHDVLFLLDEFKHLGKLEAVETAITTIAGYKG RFMFIIQSLSALTGTYDEAGKQNFLSNTGVQVFMATADDETPTYISKAIGDYTFQARSTSYSQARMFDHN IQISEQGAPLLRAEQVRLLDDDHEIVLIKGQPPLKLRKVRYYSDLILKRLFESQQGSLPEPASLRLPEDT NIFEGKLDQKAVDPISQKPVQIEESDYGKVVTPVSRPVAEGEHSAVIEVRTGSNEVDDKHEYRGADAATS EELLDIAPALLAQRELLEQIISLQQRGGTDSGT |
| Nucleotide Sequence: 1992 bp [Download] |
| >gi|222080117|ref|NC_011982.1|:c152772-150781 Agrobacterium vitis S4 plasmid pTiS4, complete sequence GTGATGAATTCAGGCAAGTACACGCCAATAGGCCTAGCTGCGATCATTGCATGTTCACTGGCCGTTGGTT TTTGTGCAGCAAGTCTCTATGTCACATTTCGCCATGGATTTACGGGCGAAAAGATGATGACTTTCAGCGT TTTTACGTTCCTGTACGAGACACCACCTTACTTGGGGTACGCAAGCCCTACGTTCTACCGCGGACTTGCC ATCATCGTGGTGACGTCGACAGTTGTGTTGCTAGGCCAACTGTTGTTATCGATGCGCGATCGCCAACATC ACGGCACCGCTCGCTGGGCCGGTTCAAGCGAGATGCGGCACGCCAAATACCTCCAGCGCTACAGTCACGT CACGGGTCCCATATTCGGCAAAACATGCGGACCGCGCTGGTTCGGTAGCTACCTGAGTAATGGAGAACAA CCTCACAGTCTTGTTGTTGCCCCAACCCGCGCTGGTAAGGGCGTAGGCGTCGTTATCCCGACGTTGCTAA CCTTTAAGGGCTCAGTAATCGCTTTGGATGTGAAAGGCGAGCTATTTGAACTCACATCGAGGGCGCGCAG ATCAAGCGGCGACGCCGTTTTCAAGTTCTCGCCCCTAGATCCAGAGCGGCGAACCCACTGTTACAACCCC GTGCTTGATATTGCCGCGTTGCCGGCCGAACGGCGCTTTACAGAAACGCGTCGCCTTGCTGCGAATCTCA TCACAGCCAAAGGAAAGGGAGCGGAGGGTTTCATCGACGGCGCACGGGATCTTTTCGTAGCAGGCATATT GAGTTGTATTGAGCGCGGCACACCAACGATCGGCGCGGTTTACGACCTGTTCGCTCAGCCGGGCGAAAAA TACAAGCTATTTGCGCAACTGGCGGAGGAAACACAAAACAAAGAGGCTCAGCGAATCTTCGACAATATGG CCGGAAATGACACCAAAATACTGACGTCCTACACATCGGTGCTCGGCGACGGCGGCCTCAATCTTTGGGC CGATCCACTCGTTAAGGCGGCTACAAGCCGCTCGGATTTTTCCGTCTACGATTTGCGGCGGAAAAAGACT TGCATTTATCTTTGTGTCAGCCCGAATGATCTCGAAGTCGTAGCGCCGTTGATGCGTCTTCTCTTCCAGC AGGTTGTATCAATCCTGCAGCGATCGCTGCCCCTTGGGGATGAACGGCACGATGTTCTATTTCTCCTCGA TGAGTTCAAGCACCTGGGCAAGCTGGAAGCCGTAGAGACGGCGATTACTACGATCGCCGGCTACAAGGGC CGCTTCATGTTCATCATACAGAGCCTGTCGGCTTTGACCGGAACCTATGATGAAGCTGGTAAGCAAAATT TCCTCAGCAATACTGGTGTGCAGGTATTCATGGCGACCGCTGATGACGAGACGCCAACCTACATTTCTAA AGCTATCGGCGACTACACGTTCCAAGCTCGCTCGACTTCGTACAGCCAAGCGCGCATGTTTGATCACAAC ATCCAAATCTCCGAACAAGGAGCGCCGCTTCTGCGTGCCGAACAGGTCCGCCTACTCGACGATGACCATG AAATAGTCCTTATCAAGGGCCAACCTCCCCTTAAACTGCGAAAAGTGCGATATTATTCGGATCTCATATT GAAGCGGCTCTTCGAAAGCCAACAGGGTTCCCTTCCCGAGCCCGCATCTTTGAGGCTGCCGGAAGATACG AACATCTTCGAAGGCAAGCTTGACCAGAAAGCAGTCGATCCAATATCGCAAAAACCGGTGCAGATTGAAG AGAGCGACTACGGGAAAGTCGTTACCCCCGTAAGCAGACCTGTGGCCGAGGGAGAGCACAGCGCGGTGAT AGAAGTTCGCACCGGTTCAAACGAAGTTGATGACAAACATGAATACAGGGGCGCGGACGCCGCAACCTCC GAGGAGCTTCTGGACATTGCTCCAGCTCTTCTGGCGCAACGCGAACTCCTTGAACAGATCATTTCTCTCC AGCAACGAGGTGGAACAGATTCCGGCACTTGA |