| Protein ID: 21243354 |
 T4SS name [ID] | VirB [392] |
| Gene symbol | virD4 |
| Locus tag | XAC2623 |
| Strain | Xanthomonas axonopodis pv. citri str. 306 |
| Replicon | chromosome [GenBank: NC_003919] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 3088230..3089903 [-] |
| Product | VirD4 protein |
| Component type | VirD4 |
| UniProt ID | Q8PJB2 |
| KEGG ID | xac:XAC2623 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 2.2e-111, Aligned region: 122..550 TraG-D_C [PF12696], Evalue: 1.6e-28, Aligned region: 398..511 TrwB_AAD_bind [PF10412], Evalue: 5.4e-25, Aligned region: 182..517 |
| Protein Sequence: 557 a.a. [Download] |
| >gi|21243354|ref|NP_642936.1| virD4 gene product [Xanthomonas axonopodis pv. citri str. 306] MSKPKIIAIATLVAVLAGYCLSGYLTLLLLRLDTGLYGWDTYYRYFSALGLPQVAPYATKIKIAGVLGFG LPVLVWAIAVVLIVKPKARALHGDARFAGAADLSKHGLFKPSGNGIVVGKFNGKLVRLSGQQFVILAAPT RSGKGVGVVIPNLLEYQESVVVLDIKQENFDLTSGWRASQGHEVFLFNPFAEDRRTHRWNPLTYVSNDPA FRVSDLMSIAAMLYPDGSDDQKFWVSQARNAFMAFALYLFENWDEELSLGFPGGAGAPTLGGIYRLSSGD GTDLKKYLKSLSERRFLSSNAKSAFANLLSQADETFASIMGTLKEPLNAWINPVLDAATSADDFVLTDLR KKKMTIYIGIQPNKLAESRLIINLLFSQIINLNTRELPKSNPELKYQCLLLMDEFTSIGKVDIIATAVAY MAGYNIRLLPIIQSMAQLDATYGKDLSRTIITNHALQILYAPREQQDANDYSEMLGYTTIKKKNVTRGRE TTHSVSEERRALMLPQELKAMGNEKEVFLYEGIPHPVKCDKIRYYEDRHFTARLLPKTEVKTLTIRM |
| Nucleotide Sequence: 1674 bp [Download] |
| >gi|21240774|ref|NC_003919.1|:c3089903-3088230 Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome ATGTCCAAACCCAAAATCATCGCAATTGCCACGCTGGTGGCGGTTCTAGCCGGATATTGCCTGTCCGGCT ATCTGACCCTGCTGTTGCTGCGGCTCGACACCGGTCTGTACGGGTGGGACACCTACTACCGCTATTTCAG CGCGCTTGGGTTGCCCCAAGTGGCGCCTTACGCGACCAAGATCAAGATTGCGGGCGTGCTTGGATTCGGG CTGCCGGTGCTGGTCTGGGCGATTGCCGTTGTGCTCATCGTCAAGCCCAAGGCGCGCGCCCTGCACGGTG ACGCGCGCTTCGCCGGCGCCGCCGATCTCTCCAAGCACGGGCTGTTCAAGCCCAGCGGAAACGGCATCGT CGTCGGCAAGTTCAACGGCAAGCTGGTGCGATTGAGCGGCCAGCAATTCGTGATTCTTGCTGCACCGACG CGCTCGGGTAAGGGCGTCGGTGTCGTCATCCCGAACCTCTTGGAGTATCAAGAGTCGGTCGTGGTCCTGG ACATCAAGCAGGAGAACTTCGACCTGACCAGTGGCTGGCGTGCCAGCCAGGGCCACGAGGTCTTCCTGTT CAATCCGTTCGCCGAAGACCGTCGCACGCATCGCTGGAATCCATTGACCTATGTGTCGAACGATCCCGCA TTTCGCGTTTCGGATTTGATGAGCATCGCAGCGATGTTGTACCCGGACGGATCCGACGACCAGAAGTTCT GGGTGAGCCAGGCGCGCAACGCCTTCATGGCGTTCGCGTTGTACCTGTTCGAAAACTGGGACGAGGAGCT CTCGCTCGGTTTTCCGGGTGGGGCAGGAGCACCCACCTTGGGCGGAATTTATCGCCTTTCGTCGGGTGAC GGCACCGATCTCAAGAAATATCTGAAGTCGCTGTCCGAGCGGCGGTTCCTCAGCAGCAACGCCAAGTCGG CCTTTGCCAACCTGCTGTCACAGGCGGATGAGACCTTCGCCTCGATCATGGGCACCTTGAAGGAGCCGCT CAATGCGTGGATCAATCCGGTTCTGGACGCTGCAACCAGTGCGGACGACTTCGTGCTCACGGACCTTCGC AAGAAGAAGATGACCATCTACATCGGCATCCAGCCCAACAAGCTGGCCGAAAGCCGCCTGATCATCAACC TGCTCTTCAGCCAGATCATCAACCTCAACACCCGCGAACTGCCCAAATCCAACCCCGAGCTCAAGTACCA GTGCCTGCTGCTGATGGACGAATTCACCTCGATCGGCAAGGTGGACATCATCGCGACCGCGGTAGCCTAC ATGGCCGGCTACAACATCCGCCTGCTGCCCATCATCCAAAGCATGGCCCAGCTGGACGCGACCTACGGCA AAGATCTGTCACGCACCATCATCACCAATCACGCCCTGCAGATCCTTTACGCACCACGCGAACAGCAGGA CGCCAACGACTATTCCGAGATGCTGGGATACACCACCATCAAGAAGAAGAACGTCACCAGAGGGCGGGAG ACCACCCATAGCGTGTCAGAAGAACGCCGGGCGCTGATGTTGCCGCAGGAGCTCAAGGCGATGGGCAATG AAAAGGAAGTGTTCTTGTACGAGGGAATCCCGCACCCGGTGAAGTGCGACAAGATCCGCTACTACGAGGA TCGCCACTTCACTGCGCGCTTGTTGCCGAAAACCGAAGTGAAGACGCTTACCATCAGAATGTGA |