| Protein ID: 190404484 |
 T4SS name [ID] | VirB [16] |
| Gene symbol | - |
| Locus tag | pRi2659_p141 |
| Strain | Agrobacterium rhizogenes plasmid pRi2659 (NC_010841) |
| Replicon | plasmid pRi2659 [GenBank: NC_010841] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 175560..177542 [+] |
| Product | type IV secretion system protein VirD4 |
| Component type | VirD4 |
| UniProt ID | A8W0J5 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 9.1e-155, Aligned region: 97..538 TraG-D_C [PF12696], Evalue: 1.4e-27, Aligned region: 391..509 TrwB_AAD_bind [PF10412], Evalue: 2.2e-23, Aligned region: 138..521 AAA_10 [PF12846], Evalue: 4.8e-07, Aligned region: 140..467 |
| Protein Sequence: 660 a.a. [Download] |
| >gi|190404484|ref|YP_001961115.1| rcorf140 [Agrobacterium rhizogenes] MNSGKYTPIGLAASIACSLAVGFCAASLYVTFRHGFTGETMMTFNVFAFLYETPPYLGYASPTFYRGLAI IVATSTLVLLCQLLLSMREREHHGTARWAGSGEMRHARYLRRYSHVTGPIFGKTCGPRWFGSYLSNGEQP HSLVVAPTRAGKGVGVVIPTLLTFKGSVIALDVKGELFELTSRARKSSGDAVFKFSPLDPERRTHCYNPV LDIAALPPERRFTETRRLAANLITAKGKGAEGFIDGARDLFVAGILSCIERGTPTIGAVYDLFAQPGEKY KLFAQLAEETQNKEAQRIFDNMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSTSDFSVYDLRRKRTC IYLCVSPNDLEVIAPLMRLLFQQVVSILQRSLPLGDERHEVLFLLDEFKHLGKLEAVETAITTIAGYKGR FMFIIQSLSALTGTYDEAGKQNFLSNTGVQVFMATADDETPNYISKAIGDYTFQARSTSYSQARMFDHNI QISDQGAPLLRAEQVRLLDDDYEIVLIKGQPPLKLRKVRYYSDFILKRIFESQHGSLPEPASLMLPGDTN LVEGKLDQGTADTTSQKPVQIEENDHGEVVSPQNRTVADGVMPIEVRPRSNEVDDEREYQGADAATSEKL PEIAPALLAQRELLDQIISLQLRGRTASGT |
| Nucleotide Sequence: 1983 bp [Download] |
| >gi|190404344|ref|NC_010841.1|:175560-177542 Agrobacterium rhizogenes plasmid pRi2659, complete sequence ATGAATTCAGGCAAGTACACGCCAATAGGCCTGGCTGCGAGCATAGCATGTTCATTGGCCGTGGGGTTTT GTGCGGCCAGTCTCTATGTCACATTTCGCCATGGCTTTACGGGCGAAACGATGATGACTTTCAACGTTTT TGCGTTCCTGTACGAGACACCGCCTTATTTGGGATACGCAAGTCCTACGTTCTATCGCGGACTAGCCATC ATCGTTGCGACGTCAACGCTCGTGTTGCTATGCCAACTACTGTTATCGATGCGCGAGCGCGAACATCACG GCACTGCTCGCTGGGCCGGCTCCGGCGAGATGCGGCACGCCAGGTACCTCCGGCGCTACAGTCACGTCAC GGGTCCCATCTTCGGCAAGACATGTGGACCACGTTGGTTTGGCAGCTACCTAAGTAACGGAGAACAACCT CACAGCCTTGTTGTCGCGCCAACTCGCGCTGGTAAGGGTGTCGGCGTCGTTATCCCGACGTTGCTAACCT TCAAGGGCTCAGTAATTGCCTTGGATGTGAAAGGCGAGCTATTTGAACTCACATCGAGGGCGCGTAAATC AAGTGGCGACGCGGTTTTCAAGTTCTCGCCCTTAGATCCAGAGCGGCGAACGCATTGTTACAATCCCGTG CTGGATATTGCCGCGTTGCCGCCCGAACGGCGCTTTACAGAAACGCGCCGCCTCGCTGCGAATCTCATCA CAGCCAAAGGCAAGGGAGCCGAAGGTTTCATCGACGGGGCACGGGATCTTTTCGTAGCAGGCATATTGAG TTGCATTGAGCGCGGCACACCAACGATCGGTGCCGTTTACGATCTGTTTGCTCAGCCGGGTGAAAAGTAC AAACTATTTGCGCAACTCGCGGAGGAAACACAAAACAAAGAGGCTCAGCGTATCTTCGACAATATGGCGG GGAATGACACCAAAATCCTGACATCCTACACATCGGTGCTCGGCGACGGCGGACTCAATCTTTGGGCCGA TCCACTCGTTAAAGCGGCTACAAGCACCTCGGATTTTTCCGTCTACGATCTGCGGCGGAAGAGGACTTGT ATTTATCTTTGTGTCAGCCCGAACGATCTCGAAGTCATAGCGCCCTTGATGCGTCTTCTCTTCCAGCAGG TTGTATCAATCCTGCAGCGATCGCTGCCACTTGGAGATGAACGGCACGAAGTTCTGTTTCTCCTCGATGA GTTCAAGCACTTGGGCAAGCTGGAAGCTGTGGAGACGGCAATTACGACGATCGCCGGCTACAAGGGCCGC TTCATGTTTATTATTCAGAGTCTTTCGGCTTTGACAGGAACTTATGATGAAGCTGGTAAGCAAAATTTTC TCAGCAATACGGGTGTGCAGGTATTCATGGCGACTGCTGATGACGAGACGCCCAACTACATTTCCAAAGC TATCGGCGACTACACATTCCAGGCTCGCTCAACGTCGTACAGCCAAGCGCGCATGTTTGATCATAACATC CAAATCTCCGACCAAGGAGCACCGCTTTTGCGCGCCGAACAAGTCCGCCTACTCGACGACGATTATGAAA TAGTCCTTATCAAAGGCCAACCTCCCCTCAAACTGAGAAAAGTGCGATATTATTCGGATTTCATATTGAA GCGAATTTTCGAAAGCCAACACGGTTCCCTTCCCGAGCCCGCATCTTTGATGTTGCCGGGAGACACAAAC CTCGTTGAAGGCAAGCTCGACCAGGGAACAGCCGATACAACTTCGCAAAAACCGGTGCAGATTGAAGAGA ACGACCATGGGGAAGTCGTTTCCCCCCAAAACAGAACTGTGGCTGATGGAGTAATGCCAATAGAAGTTCG CCCCCGTTCAAACGAAGTTGATGACGAGCGGGAATACCAAGGCGCGGACGCCGCAACCTCTGAGAAGCTT CCGGAAATTGCTCCGGCTCTTTTGGCGCAGCGCGAACTCCTCGACCAGATCATTTCGCTCCAGCTACGAG GTAGAACAGCCTCCGGCACTTGA |