| Protein ID: 190014784 |
 T4SS name [ID] | VirB [15] |
| Gene symbol | virD4 |
| Locus tag | pTiBo150 |
| Strain | Agrobacterium tumefaciens plasmid Ti plasmid pTiBo542 (NC_010929) |
| Replicon | plasmid Ti plasmid pTiBo542 [GenBank: NC_010929] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 167555..169513 [+] |
| Product | type IV secretion system protein VirD4 |
| Component type | VirD4 |
| UniProt ID | A5WY67 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 3.5e-159, Aligned region: 97..537 TraG-D_C [PF12696], Evalue: 1.7e-27, Aligned region: 391..509 TrwB_AAD_bind [PF10412], Evalue: 1.4e-22, Aligned region: 138..521 AAA_10 [PF12846], Evalue: 1.6e-06, Aligned region: 140..467 |
| Protein Sequence: 652 a.a. [Download] |
| >gi|190014784|ref|YP_001967548.1| VirD4 [Agrobacterium tumefaciens] MNSSKTSPQRMTLSIVCSLAAGFCAASCYVTFRRGFNGEAMMTFDVFAFWYETPLYLGYASTVFWRGLSV VIFTSLIVLSSQLIISLRNQKHHGTARWAEIGEMRHAGYLQRYSRIKGPIFGKTCGPLWFGSYLTNGEQP HSLVVAPTRAGKGVGIVIPTLLTFKGSVIALDVKGELFELTSRARKASGDAVFKFSPLDPERKTHCYNPV LDIAALPPERQFTETRRLAANLITAKGKGAEGFIDGARDLFVAGILTCIERGTPTIGAVYDLFAQPGEKY KLFAQLAEESLNKEAQRIFDNMAGNDTKILTSYTSVLGDGGLNLWVDPLIKAATSRSDFSVYDLRRKKTC IYLCVSPNDLEVLAPLMRLMFQQLVSILQRSLPGEDECHEVLFLLDEFKHLGKLEAIETAITTIAGYRGR FMFIIQSLSALSGTYDDAGKQNFLSNTGVQVFMATADDETPTYISKAIGEYTFKARSTSYSQARMFDHNI QISDQGAALLRPEQVRLLDDQSEIVLIKGRPPLKLRKVQYYSDRTLKGLFERQMGSLPEPAPLMLSDYSN DQVQYHLAPIANFNEDAAPQNRTVAEDHGSVKVGADIPERVMGINGDEEQADAGEIPPESVVPPELTLAL TAQQQLLDQIIALQQRSRSAPA |
| Nucleotide Sequence: 1959 bp [Download] |
| >gi|190014640|ref|NC_010929.1|:167555-169513 Agrobacterium tumefaciens Ti plasmid pTiBo542, complete sequence ATGAACTCCAGCAAGACTTCGCCCCAGCGTATGACCCTGAGCATCGTATGTTCGCTGGCAGCCGGTTTTT GTGCGGCCAGCTGCTATGTAACGTTCCGCCGGGGCTTCAACGGCGAAGCGATGATGACGTTCGACGTTTT CGCTTTTTGGTATGAGACCCCGCTTTACTTGGGTTATGCCAGCACCGTCTTCTGGCGTGGTTTATCTGTT GTCATCTTTACCTCGCTGATCGTTCTTTCAAGTCAGCTCATCATATCGCTGCGCAATCAGAAGCATCATG GGACAGCTCGTTGGGCAGAAATTGGCGAAATGCGGCATGCTGGTTATCTGCAGCGTTACAGTCGCATCAA GGGGCCGATCTTTGGAAAGACATGTGGTCCCCTTTGGTTCGGCAGTTATTTGACCAATGGCGAACAGCCA CACAGTCTTGTCGTCGCGCCAACGCGTGCTGGCAAAGGCGTCGGCATCGTCATTCCAACGCTGTTGACCT TCAAGGGCTCGGTAATCGCCCTTGACGTCAAGGGAGAATTGTTTGAACTGACGTCCAGAGCACGCAAAGC GAGCGGCGACGCAGTTTTCAAGTTCTCCCCCCTAGATCCTGAGCGGAAGACTCATTGTTACAATCCGGTC CTGGATATTGCCGCACTTCCGCCCGAACGCCAGTTCACTGAAACACGCCGTCTAGCTGCGAACCTTATTA CGGCTAAGGGAAAGGGAGCAGAAGGCTTTATTGACGGCGCACGTGACCTGTTCGTCGCGGGAATCCTTAC CTGCATTGAGCGTGGCACACCAACGATTGGCGCGGTATATGACCTATTTGCGCAGCCTGGCGAAAAGTAT AAGCTTTTTGCGCAACTCGCGGAGGAAAGCCTAAACAAAGAGGCTCAGCGTATCTTCGATAATATGGCGG GCAACGACACGAAAATTCTGACATCGTACACCTCTGTGCTGGGCGACGGTGGACTGAACCTGTGGGTTGA TCCGCTTATCAAAGCAGCGACAAGCCGGTCAGACTTTTCCGTTTACGATCTCCGGAGGAAGAAGACCTGC ATTTATCTTTGTGTCAGTCCCAACGATCTGGAGGTCTTGGCACCACTTATGCGCCTGATGTTTCAGCAGC TCGTGTCAATCTTGCAGAGATCGCTGCCAGGTGAAGACGAGTGCCATGAAGTTTTATTTCTCCTCGACGA ATTCAAACACCTGGGCAAGCTTGAGGCCATAGAGACCGCGATCACAACCATCGCCGGTTACAGAGGCCGC TTTATGTTTATTATTCAAAGTCTTTCGGCCTTGTCGGGCACATACGATGACGCAGGAAAACAAAACTTTC TGAGCAATACTGGCGTACAAGTATTTATGGCCACGGCTGATGACGAAACTCCAACCTACATCTCAAAAGC TATCGGCGAATATACGTTTAAAGCGCGTTCGACCTCTTACAGTCAAGCCAGAATGTTCGACCACAACATC CAGATTTCTGATCAAGGTGCAGCCCTTTTGCGCCCCGAACAAGTGCGCCTGCTAGACGATCAGAGTGAAA TCGTTCTCATCAAAGGGCGACCTCCACTCAAATTACGAAAGGTGCAGTATTATTCCGATCGTACGCTGAA AGGCCTTTTCGAACGCCAGATGGGCTCTCTGCCTGAGCCCGCACCCTTGATGCTTTCCGACTATAGCAAC GATCAAGTTCAATACCACTTGGCTCCGATAGCAAATTTTAATGAGGATGCTGCACCGCAAAACAGAACTG TGGCCGAGGACCATGGAAGTGTTAAAGTCGGTGCTGATATCCCTGAACGCGTGATGGGAATAAATGGTGA CGAGGAACAAGCCGATGCGGGCGAGATACCGCCGGAATCGGTTGTGCCTCCAGAATTGACGCTCGCTCTG ACCGCTCAACAGCAATTGTTGGACCAGATTATTGCACTTCAGCAAAGATCGAGGTCCGCACCGGCATAG |