| Protein ID: 187729997 |
 T4SS name [ID] | VirB [421] |
| Gene symbol | - |
| Locus tag | SbBS512_0047 |
| Strain | Shigella boydii CDC 3083-94 |
| Replicon | plasmid pBS512_33 [GenBank: NC_010657] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 28637..30499 [+] |
| Product | TraG/TraD family protein |
| Component type | VirD4 |
| UniProt ID | B2TSI9 |
| KEGG ID | sbc:SbBS512_0047 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 1.8e-92, Aligned region: 147..568 TraG-D_C [PF12696], Evalue: 1.5e-22, Aligned region: 422..541 TrwB_AAD_bind [PF10412], Evalue: 2.5e-14, Aligned region: 338..555 |
| Protein Sequence: 620 a.a. [Download] |
| >gi|187729997|ref|YP_001878815.1| TraG/TraD family protein [Shigella boydii CDC 3083-94] MKTFNKSQSVFIFAVMLVAAWFAGSFIFFVLYFSQIKNLKPLKAVFRSIDAYRMDIFTDSLTLSVVTTDI RVLAFVALGAGFVVSLIIPVAALIKLNEKKENIFGDARFATINDIRESNSFTLDGDEKDGIIVGIKDKKI IRYVGAAFSAMGAGTRAGKGAGIVITNLMKYWWSVIILDPKRECFNITSLIRKVILGHEVYKFDPFSPVT HRFNPLYYVSMGTSEGFNQLENLSLIIYPYKTDGADAGSYLNKTAGGVFKSYAVALWFMIKNDKAGLKTL DIEPVFSMSKINQLFERAEPEHLLSFMNDIRSELRGKDKTLADIGVAGLKAFIEMEDKTKAQLKSNFLNG LSPFANPNVANATDGNDFDLRQVRKKRMTIYFCISGDNARLAEKITNIFFQLGIQVNLEKMPTDDPEIKH DCLFLLDEFPSIGAVDYIKSKSGLIAGYKLKLLIVYQVGSQLEEIYSYAGSKTLLASAPCKIVYSASDVK DARELSEAMGTRTVTIGSKSKSRSRGGTSRSESENLIERPLVTTNELLTLKFSEEILAMKGENPIRCEKA FYYLHEYFFGDFVKVAPELANIFPRKKGKLVMPPQKVFENEIVAKGYLAVKDVPDLDKAA |
| Nucleotide Sequence: 1863 bp [Download] |
| >gi|187729967|ref|NC_010657.1|:28637-30499 Shigella boydii CDC 3083-94 plasmid pBS512_33, complete sequence GTGAAAACTTTTAATAAGTCGCAATCTGTTTTTATATTCGCTGTTATGCTTGTTGCGGCATGGTTTGCAG GTTCATTTATTTTCTTTGTGCTTTACTTCAGCCAGATAAAGAATCTGAAACCATTGAAGGCTGTGTTCAG ATCCATTGATGCGTACAGGATGGATATTTTTACAGACAGCCTTACTTTATCTGTTGTGACTACGGATATC AGAGTTTTAGCCTTTGTTGCACTTGGAGCAGGATTTGTCGTGTCTCTTATCATCCCTGTTGCGGCGTTGA TAAAACTGAACGAGAAGAAAGAAAATATTTTCGGTGATGCGCGATTTGCAACAATTAATGATATTCGTGA GTCTAACAGTTTCACGCTTGACGGTGACGAAAAAGACGGGATTATCGTTGGTATAAAAGACAAGAAAATA ATACGCTATGTGGGAGCAGCATTCAGTGCTATGGGAGCCGGAACAAGGGCTGGTAAAGGTGCTGGTATAG TCATCACTAATCTTATGAAGTACTGGTGGAGTGTTATTATTCTCGATCCAAAAAGGGAGTGTTTTAATAT CACCAGTCTTATCAGGAAGGTGATTTTAGGTCATGAGGTTTATAAATTTGATCCCTTTAGTCCGGTAACG CACCGCTTTAACCCTTTGTATTATGTCAGCATGGGAACGAGTGAAGGTTTTAACCAGCTTGAAAATCTTT CGTTGATTATTTACCCCTATAAGACAGATGGTGCGGATGCTGGTAGCTATCTTAATAAGACGGCGGGTGG TGTTTTTAAATCTTATGCTGTCGCTTTATGGTTTATGATTAAGAATGATAAGGCTGGACTAAAAACGCTT GATATTGAGCCTGTCTTCTCAATGTCTAAAATTAATCAGCTTTTTGAGCGTGCAGAACCCGAACATCTTC TTTCATTCATGAATGATATTCGTTCAGAATTAAGGGGGAAAGACAAAACGCTTGCTGATATTGGTGTCGC TGGCCTTAAGGCATTCATTGAGATGGAGGATAAAACAAAAGCACAACTCAAAAGCAACTTTCTTAATGGA TTATCACCGTTTGCTAACCCCAATGTGGCGAATGCTACTGATGGAAATGATTTTGATTTGCGGCAGGTGC GGAAAAAACGGATGACAATTTATTTCTGTATTTCTGGTGATAATGCCAGGTTGGCTGAAAAAATAACAAA TATTTTCTTTCAGCTTGGTATACAGGTGAATCTTGAAAAGATGCCAACGGATGATCCGGAAATAAAGCAT GACTGCCTTTTTCTACTGGATGAATTCCCGTCAATTGGTGCTGTAGATTACATCAAGAGTAAATCTGGTC TTATTGCTGGTTACAAGCTGAAATTGTTGATTGTTTACCAGGTCGGCTCTCAGCTTGAGGAAATCTACAG TTATGCAGGCAGTAAAACATTACTGGCAAGTGCACCCTGCAAAATCGTTTATTCTGCTTCTGATGTTAAA GATGCACGGGAGTTATCAGAGGCGATGGGAACACGAACAGTAACTATCGGTTCGAAAAGCAAAAGTCGTA GTCGTGGAGGAACATCGAGATCTGAATCAGAAAACCTTATTGAGCGTCCACTGGTAACAACAAATGAACT ACTGACACTGAAATTTAGTGAAGAAATCCTGGCAATGAAGGGAGAAAACCCGATTCGTTGTGAAAAGGCA TTCTACTATCTCCATGAGTATTTCTTTGGTGATTTTGTGAAGGTTGCTCCGGAACTTGCAAATATTTTCC CCAGGAAGAAAGGAAAGCTGGTTATGCCTCCACAGAAAGTATTTGAAAATGAAATCGTCGCAAAAGGGTA TCTGGCAGTAAAAGATGTTCCTGATCTCGATAAAGCGGCATAA |