| Protein ID: 157803993 |
 T4SS name [ID] | VirB [491] |
| Gene symbol | - |
| Locus tag | A1E_04160 |
| Strain | Rickettsia canadensis str. McKiel |
| Replicon | chromosome [GenBank: NC_009879] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 846803..848578 [-] |
| Product | type IV secretion system component VirD4 |
| Component type | VirD4 |
| UniProt ID | A8EZH4 |
| KEGG ID | rcm:A1E_04160 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 1.7e-164, Aligned region: 120..566 TraG-D_C [PF12696], Evalue: 1.9e-28, Aligned region: 404..526 TrwB_AAD_bind [PF10412], Evalue: 6.7e-22, Aligned region: 237..535 AAA_10 [PF12846], Evalue: 5.2e-05, Aligned region: 155..481 |
| Protein Sequence: 591 a.a. [Download] |
| >gi|157803993|ref|YP_001492542.1| type IV secretion system component VirD4 [Rickettsia canadensis str. McKiel] MEWHKILKVTRNIFGHAIIYPVVIFCTMWISGAFVAIFTNEVGALGVDINAINIAYKWAYWLINVWWQLK IVDYNYLKLKLLASLLGPAIIVIIFYIKNFGKIKSLQFFKQPEKVYGDASWAKPSDIEAAGLRSKKGMLI GVDAGGYFVADGFQHALLFAPTGSGKGVGFVIPNLLFWSDSVVVHDIKLENYGLTSGWREKQGQKVFVWE PSNPDGITHCYNPLDWVSTKPGQMVDDVQKISNLIMPEKDFWNNEARSLFLGVTLYLIADHTKTKSFGEV VRTMRSDDVVYNLAVVLDTLGSVIHPVAYMNIAAFLQKADKERSGVISTMNSSLELWANPLIDSATATSD FNIQEFKKVKTTVYVGLTPDNIQRLQKLMQVFYQQATEFLSRKIPDVKEEPYGVMFLLDEFPTLGKMDTF KAGIAYFRGYRVRLFLIIQDTQQLKGTYEDAGMNSFLSNATYRITFAANNYETANLISQLVGNKTVEQRS FSKPLFFDLNISTRTQNVSQVQRALLLPQEVIQLPRDEQIVLIESFPPIKSRKIKYYEDKLFTSRLLPPT FVPIQVPFDPRANNNEDSEETETTTAPENNE |
| Nucleotide Sequence: 1776 bp [Download] |
| >gi|157803189|ref|NC_009879.1|:c848578-846803 Rickettsia canadensis str. McKiel, complete genome ATGGAATGGCATAAGATACTTAAAGTTACTAGGAATATATTTGGTCATGCTATAATTTATCCGGTTGTTA TTTTTTGTACCATGTGGATAAGCGGTGCATTTGTTGCAATTTTTACTAATGAAGTTGGAGCTTTAGGCGT AGATATAAATGCTATAAATATTGCTTATAAGTGGGCTTATTGGCTTATTAATGTTTGGTGGCAGTTAAAA ATTGTCGACTATAATTATTTAAAATTAAAGCTACTCGCATCTCTTCTTGGGCCTGCTATTATTGTTATAA TATTTTACATTAAAAATTTTGGAAAAATAAAATCATTACAATTTTTTAAGCAACCGGAAAAAGTATATGG AGATGCTAGTTGGGCTAAACCATCAGATATAGAGGCCGCAGGTCTTAGATCTAAAAAAGGTATGTTAATA GGTGTTGATGCCGGTGGATATTTTGTTGCCGATGGTTTCCAACATGCTTTATTATTTGCTCCTACCGGTT CAGGTAAAGGTGTGGGTTTTGTAATACCTAACTTGTTATTTTGGAGTGATTCTGTAGTAGTACATGATAT AAAGCTCGAAAATTACGGTTTGACGAGCGGTTGGCGTGAGAAACAAGGTCAGAAAGTTTTTGTGTGGGAG CCTTCTAATCCCGATGGTATAACTCATTGTTACAATCCGCTTGATTGGGTTAGTACTAAGCCTGGTCAAA TGGTTGATGACGTTCAAAAAATTTCAAACCTTATAATGCCTGAAAAGGATTTTTGGAATAATGAAGCACG CAGTTTATTTTTAGGTGTAACTTTATATTTAATAGCTGATCATACTAAAACTAAATCTTTTGGTGAAGTA GTGCGTACCATGAGAAGTGACGATGTAGTTTATAATCTAGCAGTCGTACTTGATACTTTAGGCAGTGTAA TACATCCTGTTGCATATATGAATATTGCTGCGTTTCTGCAAAAAGCTGATAAAGAGCGTTCAGGTGTAAT ATCTACAATGAACTCATCTCTTGAATTATGGGCAAATCCGTTAATCGATTCTGCTACCGCTACCTCTGAT TTTAATATACAAGAATTTAAAAAAGTCAAAACAACTGTATATGTAGGACTTACTCCAGATAATATACAAC GCTTGCAGAAATTAATGCAGGTATTTTATCAGCAAGCTACAGAATTTTTAAGCCGAAAAATACCCGATGT AAAAGAAGAACCTTATGGTGTGATGTTCTTACTTGATGAGTTCCCAACTCTTGGGAAGATGGATACTTTT AAAGCCGGTATAGCATATTTTAGAGGTTATAGAGTACGTTTATTTTTAATTATTCAAGATACGCAGCAAT TAAAAGGAACATATGAAGATGCCGGTATGAATTCATTCTTATCTAATGCAACATACCGTATTACTTTTGC TGCTAATAACTATGAAACAGCAAATTTAATATCGCAGCTTGTTGGTAATAAGACGGTAGAACAAAGATCA TTTAGTAAACCTTTATTTTTTGATCTTAATATTTCTACTAGAACACAAAATGTTTCTCAAGTTCAAAGGG CTTTACTTTTACCTCAAGAAGTAATACAGTTACCGAGAGATGAGCAAATTGTTTTAATAGAATCCTTTCC ACCTATAAAATCTCGTAAAATTAAGTATTACGAAGATAAGTTGTTTACTAGTAGATTATTACCGCCTACT TTTGTACCTATTCAAGTACCTTTTGATCCTAGGGCAAATAATAATGAGGATTCTGAAGAGACTGAAACAA CAACTGCTCCGGAAAATAATGAGTAA |