Protein ID: 157418129 |
T4SS name [ID] | Tra_F [111] |
Gene symbol | traF |
Locus tag | APECO1_O1CoBM46 |
Strain | Escherichia coli APEC O1 |
Replicon | plasmid pAPEC-O1-ColBM [GenBank: NC_009837] [Browse all T4SS(s) in this replicon] |
Location [Strand] | 33045..33818 [+] |
Product | conjugal pilus assembly protein TraF |
Component type | TraF_F |
UniProt ID | Q27TH6 |
KEGG ID | ecv:APECO1_O1CoBM46 |
PDB ID | NA |
Domain hit(s) vs Pfam | TraF [PF13728], Evalue: 2.7e-78, Aligned region: 33..247 |
Protein Sequence: 257 a.a. [Download] |
>gi|157418129|ref|YP_001481201.1| conjugal pilus assembly protein TraF [Escherichia coli APEC O1] MKEKVMKGMKMNKALLPLLLCCFIFPASGKDAGWQWYNEKINPKEKENKPVPAAPRQEPDIMQKLAALQT ATKRALYEAILYPGVDNFVKYFRLQNYWAQQAGLFTMSARKAMLAHPELDYNLQYSHYNGTVRNQLAADQ AQQRQAIAKLAEHYGIMFFYRGQDPIDGQLAQVINGFRDTYGLSVIPVSVDGVINPLLPDSRTDQGQAQR LGVKYFPAMMLVDPKQGSVRPLSYGFISQDDLAKQFLNVSEDFKPNF |
Nucleotide Sequence: 774 bp [Download] |
>gi|157418083|ref|NC_009837.1|:33045-33818 Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence ATGAAAGAAAAAGTGATGAAAGGAATGAAGATGAATAAAGCATTACTGCCACTGTTACTCTGCTGCTTTA TTTTTCCGGCGTCAGGAAAAGATGCAGGCTGGCAGTGGTATAACGAGAAAATAAATCCGAAGGAAAAAGA AAATAAACCTGTACCTGCAGCCCCCCGTCAGGAACCGGATATTATGCAGAAACTGGCCGCACTGCAGACG GCAACAAAGCGGGCGCTGTACGAAGCCATTCTGTATCCCGGCGTGGATAATTTTGTGAAATATTTCCGGC TGCAAAATTACTGGGCTCAGCAGGCCGGGCTTTTCACCATGAGCGCCAGAAAGGCCATGCTGGCACATCC TGAACTGGACTATAACCTGCAGTACAGTCATTACAACGGCACGGTACGGAACCAGCTGGCAGCAGACCAG GCGCAGCAGCGACAGGCCATTGCGAAACTGGCTGAACACTACGGCATCATGTTTTTTTACCGGGGGCAGG ACCCCATCGACGGGCAACTGGCGCAGGTCATTAATGGCTTCCGGGATACGTATGGTCTGAGTGTTATTCC CGTTTCCGTGGATGGCGTGATTAATCCGCTGTTGCCGGATTCCCGGACTGACCAAGGGCAGGCGCAGCGC CTCGGCGTGAAATATTTCCCGGCCATGATGCTGGTTGACCCGAAACAGGGCAGTGTTCGCCCGTTATCAT ACGGCTTTATTTCGCAGGACGACCTGGCAAAACAGTTCCTGAACGTTTCTGAAGATTTTAAACCCAATTT TTAA |