| Protein ID: 150378314 |
 T4SS name [ID] | VirB [471] |
| Gene symbol | - |
| Locus tag | Smed_6396 |
| Strain | Sinorhizobium medicae WSM419 |
| Replicon | plasmid pSMED03 [GenBank: NC_009622] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 56661..58760 [-] |
| Product | TRAG family protein |
| Component type | VirD4 |
| UniProt ID | A6UMU5 |
| KEGG ID | smd:Smed_6396 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 4.3e-94, Aligned region: 109..533 TrwB_AAD_bind [PF10412], Evalue: 1.3e-31, Aligned region: 127..517 TraG-D_C [PF12696], Evalue: 3e-30, Aligned region: 382..504 |
| Protein Sequence: 699 a.a. [Download] |
| >gi|150378314|ref|YP_001314908.1| TRAG family protein [Sinorhizobium medicae WSM419] MTKQLQAFYLLFCVGIAFVVWMLGYGLGLQLFYRDGRILETTITSNPFAPIQQFWHYKTSPALQKVALGS MLPALLAAGLVACIGLKPTSSPLGDAAFQDLASLRRRKWFRKQGHIFGRVGRNILRTKDDRHHLIIGPTR SGKGAGYVIPNALMHEGSMIVTDLKGEVFKATAGYRRQNGSQVFLFAPGSEKTNSYNPLDFIRPERGNRT TDIQNIASILVPENTESENSVWQATAQQVLAGVISYITESPFYKDRRNLAEVNSFFNSGVDLQALMKYIK EKEPYLSKFTVESFNSYVALSERAAASALLDIQKAMRPFKNERIVAATNVTDMDLRAMKRRPISIYLAPN ITDITLLRPLLTLFVQQVMNILTLEHDPNSLPVYFLLDEFRQLKRMDEIMTKLPYVAGYNIKLAFIIQDL KNLDEIYGETSRHSLLGNCGYQLVLGANDQATAEYVSRALGKRTIRYQSESRTIELMGLPRRTKVEQIRE RDLMMPQEVRQMPENKMILLIEGQRPIFGEKLRFFQTQPFKSAEAFSQANIPQVPEVDYLSPKPVPATTP EYASGGDPSVEIPSPAPAKEEKPLTAAAAEAAPVMAEPAAGEKAAAPAKRAVNRKALRTNPKATAANTGG AEASASLDAMEARIKAIEEGLKPKAAQLKEVVETKAEKLGGKSPTKRRNILDIFSATVPDPVEVGVTAE |
| Nucleotide Sequence: 2100 bp [Download] |
| >gi|150378263|ref|NC_009622.1|:c58760-56661 Sinorhizobium medicae WSM419 plasmid pSMED03, complete sequence ATGACGAAGCAGCTTCAGGCGTTCTACCTGCTCTTTTGCGTCGGGATAGCATTCGTTGTCTGGATGCTCG GGTACGGCCTGGGGCTTCAGCTCTTCTATAGGGACGGTCGGATCCTCGAAACGACAATCACGAGCAATCC TTTCGCTCCGATTCAACAGTTCTGGCATTACAAAACGAGCCCGGCCCTGCAGAAGGTCGCGCTTGGTTCG ATGCTGCCGGCGCTGCTGGCGGCGGGCCTTGTCGCCTGCATCGGATTGAAGCCGACGAGCAGCCCATTGG GGGATGCCGCGTTTCAGGACCTGGCTTCGCTACGGCGCAGGAAGTGGTTCCGCAAACAGGGACACATCTT CGGCCGGGTCGGGCGGAACATACTCCGCACCAAGGACGATCGGCATCATCTGATCATAGGCCCGACGCGC TCCGGTAAGGGTGCGGGCTATGTGATCCCCAATGCGCTGATGCATGAAGGCTCGATGATCGTTACCGATC TCAAGGGCGAAGTGTTCAAGGCGACGGCGGGTTATCGCCGCCAGAACGGCAGCCAAGTCTTCCTATTCGC GCCTGGCTCCGAAAAGACCAACAGCTATAACCCGCTGGACTTTATCCGGCCGGAGCGCGGCAATCGCACG ACCGACATTCAAAACATCGCCAGCATTCTTGTGCCCGAGAACACAGAATCGGAAAATTCCGTCTGGCAAG CGACCGCCCAACAGGTACTTGCAGGCGTGATCAGCTACATCACGGAAAGCCCCTTCTACAAAGACCGGCG CAACCTCGCCGAGGTCAATTCCTTTTTTAACAGCGGCGTCGATCTCCAGGCGCTCATGAAATACATCAAG GAAAAAGAGCCGTACCTTTCGAAGTTCACCGTCGAGAGCTTCAATTCCTACGTCGCCCTATCGGAACGCG CGGCCGCGTCTGCTCTCTTGGACATTCAAAAGGCGATGCGGCCTTTCAAGAACGAGCGGATCGTTGCCGC GACCAATGTCACCGACATGGATCTTCGCGCAATGAAGCGCCGGCCGATCTCGATCTACCTGGCGCCGAAC ATCACCGACATCACCCTGCTGCGCCCTCTCCTCACCCTGTTTGTGCAGCAGGTGATGAATATCCTCACAC TCGAGCACGATCCAAATTCCCTCCCCGTCTACTTCCTGCTCGACGAGTTCCGGCAGTTGAAGCGGATGGA CGAGATCATGACCAAGCTGCCCTATGTGGCTGGCTATAACATCAAGCTCGCCTTCATCATTCAGGATCTG AAGAACCTCGACGAGATCTACGGCGAAACCTCCCGGCATTCGCTGCTCGGCAATTGTGGGTATCAGCTCG TCCTCGGTGCCAACGACCAGGCCACAGCCGAGTACGTATCCCGCGCGCTCGGAAAGCGCACGATCCGCTA CCAGTCCGAATCTCGCACGATCGAACTGATGGGCCTGCCTCGCCGCACGAAGGTAGAGCAGATTCGCGAA CGCGATCTGATGATGCCGCAGGAGGTCCGGCAAATGCCGGAGAACAAGATGATCCTGCTCATCGAAGGAC AACGCCCGATCTTCGGTGAAAAGCTTCGCTTCTTCCAAACACAGCCCTTCAAATCAGCCGAGGCGTTTTC TCAGGCCAACATTCCGCAAGTGCCGGAAGTCGATTATCTGTCACCGAAGCCCGTGCCGGCGACAACTCCG GAATATGCCAGTGGCGGAGATCCTTCCGTCGAAATTCCCTCGCCGGCGCCAGCGAAGGAGGAGAAGCCTT TGACGGCCGCCGCGGCGGAGGCAGCTCCGGTCATGGCAGAACCTGCGGCAGGCGAGAAAGCTGCAGCACC TGCCAAACGCGCCGTCAATAGAAAGGCGCTGCGCACGAATCCTAAGGCGACTGCTGCAAACACTGGTGGT GCGGAAGCATCTGCAAGCCTCGATGCAATGGAGGCCCGGATAAAGGCCATCGAGGAAGGCCTTAAGCCAA AGGCCGCGCAGCTCAAGGAAGTGGTCGAGACGAAAGCTGAGAAGCTTGGCGGCAAGTCTCCGACCAAGCG TCGCAACATCCTGGACATCTTCAGCGCGACCGTGCCTGACCCCGTCGAAGTCGGCGTGACGGCCGAATAG |