| Protein ID: 115345544 |
 T4SS name [ID] | VirB [474] |
| Gene symbol | virB4 |
| Locus tag | RD1_A0014 |
| Strain | Roseobacter denitrificans OCh 114 |
| Replicon | plasmid pTB1 [GenBank: NC_008386] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 14019..16379 [-] |
| Product | VirB4 protein, putative |
| Component type | VirB4 |
| UniProt ID | Q07GT1 |
| KEGG ID | rde:RD1_A0014 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | CagE_TrbE_VirB [PF03135], Evalue: 8.3e-34, Aligned region: 199..384 AAA_10 [PF12846], Evalue: 7.8e-33, Aligned region: 444..709 |
| Protein Sequence: 786 a.a. [Download] |
| >gi|115345544|ref|YP_771726.1| VirB4 protein, putative [Roseobacter denitrificans OCh 114] MLDVLKTRARKDLEASEDQGEHLLVRHLPYVGAVTDDVMMLRDGDLIASFIVEGIAADTASEADVDDLSL AFSRTVTQAQSDVGIYVHRFSSVVSPKLTGVAPEVSTFAAAVDQRWQSHIETSGLRSRQAMITVTLRPSK VKSLWAKFVSGGVAAQRGTREKDVSRLNEIVDHFMEAVRVASPTRLSISSGEWIGLLRAINTGQFFTSPP GAGFMPLADMIAVGRLDFRNDTFVSFGSDSKDTRYGAVFSIKSYPSNSAPGIFNRFDLPFDMVISQSYTP VNPVESEERISRTARQMQAADDAAQTLKDQLVDALDDVASGRIGMGMHHATITVFAGTVAELDEAAASIR GAGQRAGATVVREDVGARAAFFAQHPGNYAYRARAAMISSTNFADFTALHATPAGHSRAQTPWGESVTIL PDIRGEPYRFNFHLAGELQERTVGHTLVIGMTGAGKTLGACFLLAQAARLNPRIIAFDKDQGMEMPLRAL GADYAKVRMGEPTGFNPFAAEADERGTAWLTSWLEATLAAQGTLSATQREALSNATRSNMETDPSLRTMR QFRSQLRSVDDGGDLHTRLGLWDDGQYGWLFSGEGQDETLSFNNDVTAFDLTEIFETQEVRTAWLAYVFR RIERQIEDERPTIILIDEAWKVLDDPFFEAMLKDWALTLRKKNVVLMLMTQRVDHLVNSAAGGSILESCV TTLVYPNSRYTLDEVAPLNFTDAEAAFVTSSAGGQRLALIRNGDVSTVVNMDLGALGPLLKVLGGGKGES APDGWRDDTSFWKDIG |
| Nucleotide Sequence: 2361 bp [Download] |
| >gi|115345530|ref|NC_008386.1|:c16379-14019 Roseobacter denitrificans plasmid pTB1, complete sequence GTGCTTGATGTCCTGAAAACCCGCGCCCGCAAAGATCTGGAAGCCTCGGAAGATCAGGGCGAACATCTGT TGGTCAGGCACCTGCCGTATGTCGGTGCTGTCACGGATGATGTGATGATGTTGCGCGATGGGGATCTGAT CGCGTCTTTCATCGTCGAAGGCATTGCGGCGGATACCGCCTCGGAAGCCGATGTCGATGATCTGTCACTG GCGTTTTCGCGGACGGTTACGCAAGCGCAGTCTGATGTCGGGATTTACGTTCATCGGTTCTCTTCAGTCG TGTCGCCAAAGCTGACGGGCGTGGCCCCCGAAGTCTCGACATTCGCTGCCGCCGTCGATCAGCGGTGGCA ATCGCATATCGAAACGTCCGGCCTGCGGTCACGGCAGGCGATGATCACCGTCACATTGCGCCCCTCAAAG GTTAAATCGCTCTGGGCAAAATTTGTATCTGGCGGTGTCGCGGCGCAGCGCGGCACACGCGAAAAGGACG TCTCGCGCCTGAATGAAATCGTGGATCACTTCATGGAGGCGGTGCGCGTGGCGTCGCCCACGCGGCTGAG CATTTCAAGTGGCGAATGGATCGGACTGCTGCGCGCGATCAACACCGGACAATTCTTCACCTCACCGCCG GGTGCCGGTTTCATGCCGCTGGCTGACATGATCGCAGTGGGGCGTCTGGATTTCAGAAACGATACCTTCG TGTCCTTCGGCAGCGACAGCAAGGACACGCGCTATGGGGCCGTGTTCTCGATCAAGTCCTATCCGTCAAA CTCTGCGCCGGGCATCTTCAACAGGTTCGATTTGCCCTTCGATATGGTGATTTCGCAATCCTATACGCCG GTGAACCCGGTTGAGTCCGAAGAACGGATCAGCCGGACGGCGCGTCAGATGCAGGCGGCGGATGACGCGG CGCAAACCTTGAAGGACCAACTGGTCGATGCGCTCGATGATGTTGCCTCCGGGCGGATTGGCATGGGGAT GCACCATGCGACGATCACCGTCTTTGCGGGCACGGTGGCGGAACTGGATGAGGCGGCTGCGAGTATTCGC GGGGCAGGGCAGAGGGCAGGGGCCACGGTCGTGCGCGAGGATGTGGGCGCGCGCGCCGCATTCTTTGCCC AGCATCCGGGGAATTATGCCTACCGCGCCCGTGCCGCCATGATATCGAGCACCAACTTCGCTGATTTCAC CGCCCTGCACGCAACGCCTGCCGGTCACAGCCGCGCGCAGACGCCCTGGGGTGAGAGCGTGACGATCCTG CCGGATATTCGCGGGGAACCTTACCGCTTCAATTTCCATCTGGCGGGTGAGCTTCAGGAGCGCACCGTGG GTCACACGCTGGTCATTGGCATGACAGGTGCGGGCAAGACGCTCGGGGCGTGTTTCCTGCTGGCGCAAGC GGCACGGCTGAACCCGCGCATCATCGCTTTCGACAAAGATCAGGGCATGGAAATGCCGCTGCGTGCCCTT GGTGCGGACTATGCGAAGGTGCGGATGGGTGAACCGACCGGGTTCAACCCATTTGCTGCTGAAGCGGATG AACGTGGAACGGCGTGGCTCACATCCTGGCTTGAGGCGACGCTTGCCGCCCAAGGCACACTGAGCGCCAC CCAACGCGAGGCGCTGTCCAATGCCACCCGCTCCAACATGGAAACCGACCCCAGCCTGCGCACCATGCGC CAGTTCAGATCGCAGCTGCGATCCGTCGATGATGGCGGTGATCTGCATACGCGTCTCGGGCTTTGGGACG ACGGGCAATATGGCTGGCTCTTTTCCGGTGAAGGTCAGGACGAAACGCTGTCGTTTAACAATGATGTCAC GGCCTTCGATCTGACGGAGATTTTCGAGACACAAGAGGTCCGTACCGCGTGGCTCGCCTATGTGTTCCGC CGCATTGAACGGCAGATTGAAGACGAACGCCCCACGATCATTCTCATTGATGAGGCGTGGAAGGTTCTCG ATGATCCGTTCTTCGAGGCGATGCTGAAAGACTGGGCGCTCACGCTGCGCAAAAAGAACGTCGTTCTGAT GCTGATGACCCAGCGCGTTGATCATCTGGTCAACAGTGCGGCGGGCGGCTCCATTCTCGAAAGCTGTGTC ACCACGCTGGTCTACCCCAACAGCCGGTACACGCTGGATGAAGTCGCCCCGTTGAATTTCACCGACGCGG AAGCTGCCTTCGTGACGTCTTCGGCGGGCGGCCAACGGCTGGCACTGATCCGAAACGGCGATGTCAGCAC GGTTGTGAACATGGACCTCGGCGCACTCGGCCCGCTCCTGAAGGTGCTGGGCGGCGGCAAAGGCGAAAGC GCACCGGATGGATGGCGCGATGACACCAGTTTTTGGAAGGATATCGGATAA |