| Protein ID: 115345543 |
 T4SS name [ID] | VirB [474] |
| Gene symbol | - |
| Locus tag | RD1_A0013 |
| Strain | Roseobacter denitrificans OCh 114 |
| Replicon | plasmid pTB1 [GenBank: NC_008386] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 13178..13888 [-] |
| Product | RC163, putative |
| Component type | VirB5 |
| UniProt ID | Q07GT2 |
| KEGG ID | rde:RD1_A0013 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS [PF07996], Evalue: 7.2e-16, Aligned region: 27..221 |
| Protein Sequence: 236 a.a. [Download] |
| >gi|115345543|ref|YP_771725.1| RC163, putative [Roseobacter denitrificans OCh 114] MKPFRNRMAVTCLIASVSFGGAAQAQGVPVIDTTAIAQFVAQLDQARQAYTVQLQELTNLENQLASMIGP RAISAILNDVTEIQKRVSATSLNEIQDAVLSGTALTDLAELNDAISDIRNRFDLAGLNDIFTSLEPIDAA ITEQATAGVAAIATAEDTYVRANDAMDRINTMITGIDGNADLKASIDYNTRVMAELAVLLNENLRVQAAA TNVAGANALAQARDNAAARQFNLIGD |
| Nucleotide Sequence: 711 bp [Download] |
| >gi|115345530|ref|NC_008386.1|:c13888-13178 Roseobacter denitrificans plasmid pTB1, complete sequence ATGAAACCATTCCGCAACAGGATGGCAGTCACCTGTCTTATCGCTTCGGTCTCCTTTGGAGGGGCGGCGC AGGCGCAGGGCGTCCCCGTCATAGACACCACGGCAATCGCTCAGTTTGTCGCGCAACTGGATCAGGCGCG GCAAGCCTATACCGTCCAGCTTCAGGAGTTGACCAACCTTGAAAACCAACTGGCGTCGATGATTGGCCCG CGTGCAATCTCGGCCATTCTCAACGATGTGACAGAGATCCAGAAACGGGTCTCGGCCACGTCGCTGAACG AGATACAGGACGCCGTGCTGTCTGGTACGGCGCTCACCGATCTGGCGGAACTGAACGATGCTATTTCCGA CATCCGAAACCGGTTCGATCTAGCGGGGCTCAATGATATTTTTACCTCCCTTGAGCCGATTGATGCCGCA ATCACCGAACAGGCGACAGCGGGCGTGGCAGCAATCGCCACGGCGGAGGACACCTATGTGCGGGCCAATG ATGCGATGGACCGGATCAACACGATGATCACCGGCATCGACGGTAACGCCGATCTGAAAGCCAGCATTGA TTACAACACGCGCGTCATGGCCGAACTGGCTGTTTTGCTGAACGAGAACCTGCGGGTGCAGGCCGCGGCG ACAAATGTCGCCGGTGCCAATGCACTCGCCCAGGCGCGGGACAACGCCGCCGCACGTCAATTCAACCTGA TAGGAGACTAA |