| Protein ID: 114883645 |
 T4SS name [ID] | VirB [30] |
| Gene symbol | virD4 |
| Locus tag | D763_p2035 |
| Strain | Plasmid pLB1 |
| Replicon | plasmid pLB1 [GenBank: NC_008330] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 52724..54640 [-] |
| Product | VirD4 type IV secration protein |
| Component type | VirD4 |
| UniProt ID | Q0KKK9 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 8.5e-107, Aligned region: 96..539 TrwB_AAD_bind [PF10412], Evalue: 1.7e-28, Aligned region: 133..518 TraG-D_C [PF12696], Evalue: 4.7e-28, Aligned region: 386..506 |
| Protein Sequence: 638 a.a. [Download] |
| >gi|114883645|ref|YP_740335.1| VirD4 type IV secration protein [uncultured bacterium] MIQKTGSNRLALALVLLPITLLLIGLLTGTVAWFFLKMPAAAYDPLKLPGFFWYYRHDPVVTEALWRGAV IGVPLPVLLMAIVLRPKKNLHGEARFAREGEIRKAGLRAKKGIVLGRVRNGFFRNGFLMVGKMEHVLLEA PTGSGKGVGIVIPNLLQWPDSVVVLDIKRENYEITAGFRRKGGQKVVLFNPTDREGRTARYNPLSYINRA DPIEVLVELQKIATMLFVPPEKGEAFWTESARTAFVGIASWIAAKSERPFSFGEIYRTITMPGMKAFFAK EAGDSALSEGCRAALSDFTSSADNTFTGIIQTVTSKLNLWINPIVDRATAESDFSLTDLRRIPTSIYLGV SPDELDRVAPLYNLFFQQLIDLNTRQLPDESEKLSVLLILDEFARLGRAQVIANAFSYVRGYGLRLLPVI QSRSQLRNVYGEHGADEIVSNCGVEIAFTPKELRVAKELSERLGYLGQDAESRSLTIHGLLANRSKTISE QRRALMLPQELMQLPEDDILVIRGGIPVIRGKKIRYFKDSVFRSRLTTAPAVPALPKPVAPIVPVDDLSD EELAAFNDYSALADDQVQDIPEDVLALDRDMPNLTVKDGSMAFDEIDFDDIIGPDPTKEEWEGQRRDLVL SEGEEYGR |
| Nucleotide Sequence: 1917 bp [Download] |
| >gi|114883608|ref|NC_008330.1|:c54640-52724 Uncultured bacterium plasmid pLB1 DNA, complete sequence TTGATCCAGAAAACAGGCTCTAACAGGCTCGCACTGGCCCTCGTCCTCCTTCCGATCACGCTCCTGCTGA TCGGCCTGCTGACCGGCACGGTGGCGTGGTTCTTCCTCAAGATGCCCGCCGCGGCTTATGATCCGCTCAA GCTCCCCGGCTTCTTCTGGTATTACCGGCATGATCCTGTCGTGACCGAAGCGCTTTGGCGAGGCGCGGTC ATAGGCGTGCCGCTGCCGGTATTGCTCATGGCGATCGTCCTGCGGCCGAAAAAGAACCTTCACGGTGAAG CTCGTTTCGCGCGCGAAGGTGAAATCCGCAAGGCGGGCCTTCGCGCGAAAAAGGGCATTGTGCTCGGCCG CGTCCGCAATGGTTTTTTCCGCAACGGCTTTCTCATGGTGGGTAAGATGGAGCATGTATTGCTCGAAGCC CCTACCGGATCGGGCAAGGGCGTCGGCATCGTTATTCCCAATCTGTTGCAATGGCCGGATTCGGTTGTCG TGCTCGATATTAAGCGTGAGAACTACGAAATCACGGCGGGTTTCCGCCGCAAGGGCGGCCAAAAGGTTGT GCTGTTCAACCCTACGGACAGAGAAGGCCGCACGGCCCGCTACAACCCGCTTAGCTACATCAACAGGGCC GATCCAATTGAGGTCCTGGTCGAATTGCAGAAGATCGCGACGATGCTCTTCGTGCCCCCGGAGAAGGGCG AGGCATTCTGGACAGAATCAGCCCGCACGGCCTTTGTCGGCATTGCATCATGGATCGCGGCCAAGTCTGA ACGTCCCTTCTCGTTTGGCGAGATATACCGGACCATCACGATGCCGGGGATGAAGGCATTCTTCGCCAAG GAAGCTGGCGATAGTGCGCTATCGGAAGGGTGCCGCGCCGCGTTGAGCGATTTTACGTCCAGCGCGGACA ACACATTCACCGGCATTATCCAGACCGTCACCTCGAAGCTCAATCTCTGGATCAATCCCATTGTCGATCG CGCGACGGCCGAAAGCGACTTTTCCCTGACGGACCTTCGCCGCATCCCGACCTCGATCTATCTCGGCGTT TCGCCGGATGAACTCGATAGGGTCGCGCCGCTCTACAATCTGTTTTTCCAACAGCTGATCGACCTCAACA CGCGGCAACTGCCCGACGAAAGCGAAAAGCTGTCCGTGCTGCTCATTCTGGACGAATTTGCGCGGCTCGG CCGCGCCCAGGTCATTGCAAATGCGTTCTCCTATGTGCGCGGCTATGGGCTTCGTCTGCTTCCCGTCATC CAGTCCCGCTCCCAGCTGCGGAATGTCTATGGTGAGCATGGCGCGGACGAAATCGTATCAAACTGCGGGG TCGAAATTGCCTTCACGCCCAAGGAGCTGCGGGTCGCAAAGGAACTGTCCGAACGCCTCGGCTATCTCGG TCAGGATGCGGAAAGCCGGTCCCTGACGATACATGGATTGCTCGCCAATCGAAGCAAGACAATCTCCGAA CAGCGGCGCGCACTGATGCTCCCTCAAGAGCTGATGCAGCTGCCCGAAGACGATATTCTCGTCATCCGGG GCGGTATCCCCGTCATTCGCGGGAAGAAAATCCGCTATTTCAAGGATTCCGTTTTCCGCTCGCGCCTGAC GACTGCCCCGGCAGTGCCGGCGCTGCCCAAGCCGGTCGCGCCGATCGTGCCCGTCGATGATCTGAGCGAT GAAGAGCTGGCGGCTTTCAACGATTATTCCGCACTGGCCGATGACCAGGTGCAGGACATTCCCGAAGACG TTCTCGCCCTCGATCGCGACATGCCGAACCTCACGGTGAAGGACGGCAGCATGGCTTTCGATGAAATCGA CTTCGACGACATTATTGGTCCCGATCCGACGAAAGAGGAATGGGAAGGTCAGCGCCGGGATCTAGTTCTA AGTGAAGGAGAAGAATATGGCCGATAA |