SecReT4

T4SS
References

T4SS ID	30
Strain	Plasmid pLB1
Replicon	plasmid pLB1 [Browse all T4SS(s) in this replicon]
Accession	NC_008330
Location	52724..64582
Name	VirB
Function	Conjugation
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	1	1	1	1	1	1	0	1	1
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_008330

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	D763_p2029 (parB2)	48234..49253 [+], 1020	114883641	ParB-like partition protein
2	D763_p2032 (mobC)	49444..49995 [+], 552	114883642	MobC-like protein
3	D763_p2036 (virD2)	49982..51049 [+], 1068	114883643	relaxase
4	D763_p2033	51526..52734 [-], 1209	114883644	putative DNA primase
5	D763_p2035 (virD4)	52724..54640 [-], 1917	114883645	VirD4 type IV secration protein	VirD4
6	D763_p2044 (virB11)	54618..55610 [-], 993	114883646	VirB11 type IV secretion protein	VirB11
7	D763_p2045 (virB10)	55607..56782 [-], 1176	114883647	VirB10 type IV secretion protein	VirB10
8	D763_p2037 (virB9)	56877..57719 [-], 843	114883648	VirB9 type IV secretion protein	VirB9
9	D763_p2038 (virB8)	57716..58399 [-], 684	114883649	VirB8 type IV secretion protein	VirB8
10	D763_p2034	58447..58620 [-], 174	114883650	hypothetical protein
11	D763_p2039 (virB6)	58740..59756 [-], 1017	114883651	VirB6 type IV secretion protein	VirB6
12	D763_p2018	59797..60102 [-], 306	114883652	hypothetical protein
13	D763_p2040 (virB5)	60105..60818 [-], 714	114883653	VirB5 type IV secretion protein	VirB5
14	D763_p2041 (virB4)	60832..63216 [-], 2385	114883654	VirB4 type IV secretion protein	VirB4
15	D763_p2042 (virB3)	63203..63547 [-], 345	114883655	VirB3 type IV secretion protein	VirB3
16	D763_p2043 (virB2)	63554..63895 [-], 342	114883656	VirB2 type IV secretion protein	VirB2
17	D763_p2046 (virB1)	63917..64582 [-], 666	114883657	VirB1 type IV secretion protein	VirB1
18	D763_p2047	64597..64920 [-], 324	114883658	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Miyazaki R; Sato Y; Ito M; Ohtsubo Y; Nagata Y; Tsuda M (2006). Complete nucleotide sequence of an exogenously isolated plasmid, pLB1, involved in gamma-hexachlorocyclohexane degradation. Appl Environ Microbiol. 72(11):6923-33. [PudMed:16963556]