SecReT4
Protein ID: 113473824
T4SS name [ID]Tra_F [517]
Gene symboltraD
Locus tagpCAR3_146
StrainSphingomonas sp. KA1 plasmid pCAR3 (NC_008308)
Repliconplasmid pCAR3 [GenBank: NC_008308] [Browse all T4SS(s) in this replicon]
Location [Strand]149149..151491 [-]
Productconjugal DNA metabolism
Component typeTraD_F
UniProt IDQ0KJG7
KEGG IDNA
PDB IDNA
Domain hit(s) vs Pfam TrwB_AAD_bind [PF10412], Evalue: 8.6e-144, Aligned region: 226..610
T4SS-DNA_transf [PF02534], Evalue: 2.3e-21, Aligned region: 431..606
TraG-D_C [PF12696], Evalue: 2.8e-19, Aligned region: 470..591
AAA_10 [PF12846], Evalue: 2e-14, Aligned region: 241..546
DUF87 [PF01935], Evalue: 4.8e-06, Aligned region: 240..293
Protein Sequence: 780 a.a.     [Download]
>gi|113473824|ref|YP_718087.1| conjugal DNA metabolism [Sphingomonas sp. KA1]
MAGPDTWSDRARPGKLQHHSARGTMPRNAGDFTRGSQLITHEFLMWFASARLPFLVWFFTFLFVLSVVLA
LRLHEHEIEMILMRIYAAGWAFMEFSPSKVINLTVPSGEAIPAPISMVASHPDVVIAWNKLMRAIWGSLF
ISLFVAVPLAVWFVDFSKRRGKSILEERHQRGAMLVDGAELASVINAHNRAQLDQEIAEKLPGKSFDQIM
AMSFEDRKAAGIHHVYSMAGIPFPWRTEQSHTMMIGSTGTGKTTQMRALIAQMRVRRDRAVVFDLTGAYV
EAFYNPETDIILNPMDERCPSWSVFAEAKNHADFTGIAAALLPADGGGAEPFWMLAARTLFVESCIKLIK
EGQATNQALASRLMMADLKAVHKMLENTVADPLTAPEAAKMAESIRAVFNTNAQALRFLPEGKAPFSICD
WVRVEDKPGSILFITSSHNELVLNRALLSLWMNLAVHTLMRLPRTRDLRTWFFFDEVHALHRLPAIEDGL
QTARGFGGAFVLGIHSFAKLSETYGKEGAQNLAALARTKLILAAADRDTAEHCSDYIGHREVRMMDEAYS
YGYSNIRDAATITPRSEVQPLVLPDDIMKLPSLRGFVVFPEGFDAARIKLAWKDYPKVADGYVLRENVEP
IEFSNAAGGEADDAEDKGGRETRDELQPANLIEPDEKQAKPAAAVPGQDEAEPLPPQVGAESGAPAVRIA
ATMSFRAGGASPVADTHSRHAPSEAKAITQSAAKAAGQRANQNARELGEALEPETRIERSAGGPKGTDEP
EIAPDEGMEI
 
Nucleotide Sequence: 2343 bp     [Download]
>gi|113473678|ref|NC_008308.1|:c151491-149149 Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence
ATGGCGGGGCCTGACACCTGGTCGGACCGCGCTCGGCCGGGCAAGTTGCAGCACCATTCGGCGCGCGGAA
CCATGCCGCGCAATGCCGGTGATTTCACCCGCGGCTCGCAGCTCATCACTCATGAATTCCTGATGTGGTT
TGCCTCTGCCCGGCTCCCCTTCCTGGTCTGGTTCTTCACGTTCCTGTTCGTGCTCTCGGTGGTCCTCGCA
CTGCGGCTTCACGAACACGAAATCGAGATGATCCTGATGCGGATCTATGCCGCAGGCTGGGCCTTCATGG
AGTTCTCGCCGAGCAAGGTGATCAACCTCACCGTGCCATCGGGCGAAGCGATCCCGGCGCCGATTTCGAT
GGTGGCCTCGCACCCCGATGTGGTGATCGCCTGGAACAAGCTCATGCGCGCCATTTGGGGTTCGCTGTTC
ATCTCGTTGTTCGTCGCCGTCCCGCTCGCGGTCTGGTTCGTTGACTTCTCGAAGCGGCGCGGAAAGTCGA
TCCTCGAGGAGCGACACCAACGCGGCGCGATGCTGGTCGATGGGGCAGAGCTCGCCAGTGTCATCAATGC
CCACAATCGCGCGCAGCTGGACCAGGAAATCGCCGAAAAACTGCCCGGCAAGAGCTTCGATCAGATAATG
GCAATGAGCTTCGAAGACCGCAAGGCGGCGGGTATCCATCATGTCTATTCGATGGCCGGTATCCCCTTCC
CTTGGCGCACCGAACAGTCGCACACGATGATGATCGGCTCGACCGGTACCGGCAAGACAACCCAGATGCG
CGCACTTATCGCGCAGATGCGGGTGCGACGCGACCGGGCTGTCGTTTTCGACCTCACTGGCGCCTACGTC
GAGGCCTTCTACAACCCGGAAACCGACATCATCCTCAACCCGATGGACGAGCGCTGTCCGTCGTGGTCGG
TGTTCGCAGAGGCGAAGAACCACGCCGATTTTACCGGCATCGCCGCCGCGCTGCTGCCCGCGGATGGCGG
AGGCGCGGAACCCTTCTGGATGCTCGCTGCGCGCACGCTGTTCGTCGAGTCCTGCATCAAGCTCATCAAG
GAAGGTCAGGCGACCAACCAGGCGCTCGCAAGCCGCCTGATGATGGCCGACCTCAAGGCGGTCCACAAAA
TGCTCGAGAATACCGTCGCCGACCCGCTGACCGCGCCCGAGGCGGCCAAGATGGCGGAATCGATCCGGGC
CGTGTTCAACACCAACGCGCAGGCCCTTCGCTTTCTCCCTGAAGGCAAAGCGCCGTTTTCGATCTGCGAC
TGGGTCCGCGTCGAGGACAAGCCGGGTTCGATCCTGTTCATCACCTCCTCGCACAACGAGCTGGTGCTCA
ACCGGGCGCTGCTGTCGCTGTGGATGAACCTTGCTGTTCATACCCTGATGCGCCTGCCGCGCACGCGGGA
TCTGCGCACCTGGTTCTTCTTCGACGAGGTGCATGCGCTCCACCGCCTGCCGGCAATCGAGGACGGATTG
CAGACCGCACGAGGTTTCGGCGGCGCCTTCGTGCTCGGCATCCATTCGTTCGCCAAGCTCTCGGAGACTT
ACGGCAAGGAAGGCGCGCAGAACCTTGCTGCGCTGGCGCGCACCAAGCTCATTCTGGCCGCGGCCGACCG
TGACACCGCCGAGCATTGCTCGGACTACATTGGCCACCGCGAAGTGCGAATGATGGATGAAGCCTACAGC
TACGGCTATTCCAACATCCGCGACGCCGCGACGATCACTCCGCGCTCCGAAGTCCAGCCTCTGGTGCTCC
CCGACGACATCATGAAGCTGCCCTCGCTGCGCGGCTTCGTGGTGTTCCCTGAAGGCTTCGACGCCGCTCG
GATCAAGCTCGCCTGGAAGGACTATCCCAAGGTCGCCGATGGCTATGTCCTGCGCGAGAATGTCGAGCCG
ATCGAGTTCTCGAATGCCGCTGGCGGCGAGGCTGACGATGCGGAAGACAAGGGTGGCCGGGAGACCAGGG
ATGAGCTCCAACCTGCAAATCTGATCGAGCCCGATGAGAAACAGGCAAAGCCTGCCGCGGCGGTGCCGGG
GCAAGATGAGGCAGAGCCTCTACCGCCGCAGGTCGGCGCCGAGAGCGGCGCGCCCGCGGTCCGTATCGCA
GCGACAATGTCGTTTCGAGCGGGCGGCGCCTCGCCTGTCGCCGATACCCATTCCCGCCACGCGCCCAGCG
AGGCGAAAGCAATCACACAGTCAGCTGCCAAAGCGGCCGGACAGCGCGCGAACCAGAACGCGCGCGAGCT
GGGTGAAGCCCTTGAACCGGAAACCCGGATCGAGCGATCCGCGGGCGGGCCTAAAGGCACTGATGAGCCC
GAGATCGCGCCTGACGAGGGCATGGAGATCTAG