| Protein ID: 113473824 |
 T4SS name [ID] | Tra_F [517] |
| Gene symbol | traD |
| Locus tag | pCAR3_146 |
| Strain | Sphingomonas sp. KA1 plasmid pCAR3 (NC_008308) |
| Replicon | plasmid pCAR3 [GenBank: NC_008308] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 149149..151491 [-] |
| Product | conjugal DNA metabolism |
| Component type | TraD_F |
| UniProt ID | Q0KJG7 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 8.6e-144, Aligned region: 226..610 T4SS-DNA_transf [PF02534], Evalue: 2.3e-21, Aligned region: 431..606 TraG-D_C [PF12696], Evalue: 2.8e-19, Aligned region: 470..591 AAA_10 [PF12846], Evalue: 2e-14, Aligned region: 241..546 DUF87 [PF01935], Evalue: 4.8e-06, Aligned region: 240..293 |
| Protein Sequence: 780 a.a. [Download] |
| >gi|113473824|ref|YP_718087.1| conjugal DNA metabolism [Sphingomonas sp. KA1] MAGPDTWSDRARPGKLQHHSARGTMPRNAGDFTRGSQLITHEFLMWFASARLPFLVWFFTFLFVLSVVLA LRLHEHEIEMILMRIYAAGWAFMEFSPSKVINLTVPSGEAIPAPISMVASHPDVVIAWNKLMRAIWGSLF ISLFVAVPLAVWFVDFSKRRGKSILEERHQRGAMLVDGAELASVINAHNRAQLDQEIAEKLPGKSFDQIM AMSFEDRKAAGIHHVYSMAGIPFPWRTEQSHTMMIGSTGTGKTTQMRALIAQMRVRRDRAVVFDLTGAYV EAFYNPETDIILNPMDERCPSWSVFAEAKNHADFTGIAAALLPADGGGAEPFWMLAARTLFVESCIKLIK EGQATNQALASRLMMADLKAVHKMLENTVADPLTAPEAAKMAESIRAVFNTNAQALRFLPEGKAPFSICD WVRVEDKPGSILFITSSHNELVLNRALLSLWMNLAVHTLMRLPRTRDLRTWFFFDEVHALHRLPAIEDGL QTARGFGGAFVLGIHSFAKLSETYGKEGAQNLAALARTKLILAAADRDTAEHCSDYIGHREVRMMDEAYS YGYSNIRDAATITPRSEVQPLVLPDDIMKLPSLRGFVVFPEGFDAARIKLAWKDYPKVADGYVLRENVEP IEFSNAAGGEADDAEDKGGRETRDELQPANLIEPDEKQAKPAAAVPGQDEAEPLPPQVGAESGAPAVRIA ATMSFRAGGASPVADTHSRHAPSEAKAITQSAAKAAGQRANQNARELGEALEPETRIERSAGGPKGTDEP EIAPDEGMEI |
| Nucleotide Sequence: 2343 bp [Download] |
| >gi|113473678|ref|NC_008308.1|:c151491-149149 Sphingomonas sp. KA1 plasmid pCAR3 DNA, complete sequence ATGGCGGGGCCTGACACCTGGTCGGACCGCGCTCGGCCGGGCAAGTTGCAGCACCATTCGGCGCGCGGAA CCATGCCGCGCAATGCCGGTGATTTCACCCGCGGCTCGCAGCTCATCACTCATGAATTCCTGATGTGGTT TGCCTCTGCCCGGCTCCCCTTCCTGGTCTGGTTCTTCACGTTCCTGTTCGTGCTCTCGGTGGTCCTCGCA CTGCGGCTTCACGAACACGAAATCGAGATGATCCTGATGCGGATCTATGCCGCAGGCTGGGCCTTCATGG AGTTCTCGCCGAGCAAGGTGATCAACCTCACCGTGCCATCGGGCGAAGCGATCCCGGCGCCGATTTCGAT GGTGGCCTCGCACCCCGATGTGGTGATCGCCTGGAACAAGCTCATGCGCGCCATTTGGGGTTCGCTGTTC ATCTCGTTGTTCGTCGCCGTCCCGCTCGCGGTCTGGTTCGTTGACTTCTCGAAGCGGCGCGGAAAGTCGA TCCTCGAGGAGCGACACCAACGCGGCGCGATGCTGGTCGATGGGGCAGAGCTCGCCAGTGTCATCAATGC CCACAATCGCGCGCAGCTGGACCAGGAAATCGCCGAAAAACTGCCCGGCAAGAGCTTCGATCAGATAATG GCAATGAGCTTCGAAGACCGCAAGGCGGCGGGTATCCATCATGTCTATTCGATGGCCGGTATCCCCTTCC CTTGGCGCACCGAACAGTCGCACACGATGATGATCGGCTCGACCGGTACCGGCAAGACAACCCAGATGCG CGCACTTATCGCGCAGATGCGGGTGCGACGCGACCGGGCTGTCGTTTTCGACCTCACTGGCGCCTACGTC GAGGCCTTCTACAACCCGGAAACCGACATCATCCTCAACCCGATGGACGAGCGCTGTCCGTCGTGGTCGG TGTTCGCAGAGGCGAAGAACCACGCCGATTTTACCGGCATCGCCGCCGCGCTGCTGCCCGCGGATGGCGG AGGCGCGGAACCCTTCTGGATGCTCGCTGCGCGCACGCTGTTCGTCGAGTCCTGCATCAAGCTCATCAAG GAAGGTCAGGCGACCAACCAGGCGCTCGCAAGCCGCCTGATGATGGCCGACCTCAAGGCGGTCCACAAAA TGCTCGAGAATACCGTCGCCGACCCGCTGACCGCGCCCGAGGCGGCCAAGATGGCGGAATCGATCCGGGC CGTGTTCAACACCAACGCGCAGGCCCTTCGCTTTCTCCCTGAAGGCAAAGCGCCGTTTTCGATCTGCGAC TGGGTCCGCGTCGAGGACAAGCCGGGTTCGATCCTGTTCATCACCTCCTCGCACAACGAGCTGGTGCTCA ACCGGGCGCTGCTGTCGCTGTGGATGAACCTTGCTGTTCATACCCTGATGCGCCTGCCGCGCACGCGGGA TCTGCGCACCTGGTTCTTCTTCGACGAGGTGCATGCGCTCCACCGCCTGCCGGCAATCGAGGACGGATTG CAGACCGCACGAGGTTTCGGCGGCGCCTTCGTGCTCGGCATCCATTCGTTCGCCAAGCTCTCGGAGACTT ACGGCAAGGAAGGCGCGCAGAACCTTGCTGCGCTGGCGCGCACCAAGCTCATTCTGGCCGCGGCCGACCG TGACACCGCCGAGCATTGCTCGGACTACATTGGCCACCGCGAAGTGCGAATGATGGATGAAGCCTACAGC TACGGCTATTCCAACATCCGCGACGCCGCGACGATCACTCCGCGCTCCGAAGTCCAGCCTCTGGTGCTCC CCGACGACATCATGAAGCTGCCCTCGCTGCGCGGCTTCGTGGTGTTCCCTGAAGGCTTCGACGCCGCTCG GATCAAGCTCGCCTGGAAGGACTATCCCAAGGTCGCCGATGGCTATGTCCTGCGCGAGAATGTCGAGCCG ATCGAGTTCTCGAATGCCGCTGGCGGCGAGGCTGACGATGCGGAAGACAAGGGTGGCCGGGAGACCAGGG ATGAGCTCCAACCTGCAAATCTGATCGAGCCCGATGAGAAACAGGCAAAGCCTGCCGCGGCGGTGCCGGG GCAAGATGAGGCAGAGCCTCTACCGCCGCAGGTCGGCGCCGAGAGCGGCGCGCCCGCGGTCCGTATCGCA GCGACAATGTCGTTTCGAGCGGGCGGCGCCTCGCCTGTCGCCGATACCCATTCCCGCCACGCGCCCAGCG AGGCGAAAGCAATCACACAGTCAGCTGCCAAAGCGGCCGGACAGCGCGCGAACCAGAACGCGCGCGAGCT GGGTGAAGCCCTTGAACCGGAAACCCGGATCGAGCGATCCGCGGGCGGGCCTAAAGGCACTGATGAGCCC GAGATCGCGCCTGACGAGGGCATGGAGATCTAG |