| Protein ID: 10954816 |
 T4SS name [ID] | VirB [20] |
| Gene symbol | riorf170 |
| Locus tag | pRi1724_p171 |
| Strain | Agrobacterium rhizogenes plasmid pRi1724 (NC_002575) |
| Replicon | plasmid pRi1724 [GenBank: NC_002575] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 210487..212469 [+] |
| Product | hypothetical protein |
| Component type | VirD4 |
| UniProt ID | Q9F585 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 2.4e-155, Aligned region: 97..537 TraG-D_C [PF12696], Evalue: 1.4e-27, Aligned region: 391..509 TrwB_AAD_bind [PF10412], Evalue: 2.2e-23, Aligned region: 138..521 AAA_10 [PF12846], Evalue: 4.8e-07, Aligned region: 140..467 |
| Protein Sequence: 660 a.a. [Download] |
| >gi|10954816|ref|NP_066751.1| riorf170 [Agrobacterium rhizogenes] MNSGKYTPIGLAASIACSLAVGFCAASLYVTFRHGFTGETMMTFNVFAFLYETPPYLGYASPTFYRGLAI IVATSTLVLLCQLLLSMREREHHGTARWAGSGEMRHAGYLRRYSHVTGPIFGKTCGPRWFGSYLSNGEQP HSLVVAPTRAGKGVGVVIPTLLTFKGSVIALDVKGELFELTSRARKSSGDAVFKFSPLDPERRTHCYNPV LDIAALPPERRFTETRRLAANLITAKGKGAEGFIDGARDLFVAGILSCIERGTPTIGAVYDLFAQPGEKY KLFAQLAEETQNKEAQRIFDNMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSTSDFSVYDLRRKRTC IYLCVSPNDLEVIAPLMRLLFQQVVSILQRSLPLGDERHEVLFLLDEFKHLGKLEAVETAITTIAGYKGR FMFIIQSLSALTGTYDEAGKQNFLSNTGVQVFMATADDETPNYISKAIGDYTFQARSTSYSQARMFDHNI QISDQGAPLLRAEQVRLLDDDYEIVLIKGQPPLKLRKVRYYSDLILKRIFESQHGSLPEPASLMLPGDTN LVEGKLDQGTADTTSQKPVQIEENDHGEVVSPQNRTVADGVMPIEVRPRSNEVDDEREYQGADAATSEKL PEIAPALLAQRELLDQIISLQLRGRTASGT |
| Nucleotide Sequence: 1983 bp [Download] |
| >gi|10954646|ref|NC_002575.1|:210487-212469 Agrobacterium rhizogenes plasmid pRi1724 DNA, complete sequence ATGAATTCAGGCAAGTACACGCCAATAGGCCTGGCTGCGAGCATAGCATGTTCACTGGCCGTGGGGTTTT GTGCGGCCAGTCTCTATGTCACATTTCGCCATGGCTTTACGGGCGAAACGATGATGACTTTCAACGTTTT TGCGTTCCTGTACGAGACACCGCCTTATTTGGGATACGCAAGTCCTACGTTCTATCGCGGACTAGCCATC ATCGTTGCGACGTCAACGCTCGTGTTGCTATGCCAACTACTGTTATCGATGCGCGAGCGCGAACATCACG GCACTGCTCGCTGGGCCGGCTCCGGCGAGATGCGGCACGCCGGGTACCTCCGGCGCTACAGTCACGTCAC GGGTCCCATCTTCGGCAAGACATGTGGACCACGTTGGTTTGGCAGCTACCTAAGTAACGGAGAACAACCT CACAGCCTTGTTGTCGCGCCAACTCGCGCTGGTAAGGGTGTCGGCGTCGTTATCCCGACGTTGCTAACCT TCAAGGGCTCAGTAATTGCTCTGGATGTGAAAGGCGAGCTATTTGAACTCACATCGAGGGCGCGTAAATC AAGTGGTGACGCGGTTTTCAAGTTCTCGCCCTTAGATCCAGAGCGGCGAACGCATTGTTACAATCCCGTG CTGGATATTGCCGCGTTGCCGCCCGAACGGCGCTTTACAGAAACGCGCCGCCTCGCTGCGAATCTCATCA CCGCCAAAGGCAAGGGAGCCGAAGGTTTCATCGACGGGGCACGGGATCTTTTCGTAGCAGGCATATTGAG TTGCATTGAGCGCGGCACACCAACGATCGGTGCCGTTTACGATCTGTTTGCTCAGCCGGGTGAAAAGTAC AAACTATTTGCGCAACTCGCGGAGGAAACACAAAACAAAGAGGCTCAGCGTATCTTCGACAATATGGCGG GGAATGACACCAAAATCCTGACATCCTACACATCGGTGCTCGGCGACGGCGGACTCAATCTTTGGGCCGA TCCACTCGTTAAAGCGGCTACAAGCACCTCGGATTTTTCCGTCTACGATCTGCGGCGGAAGAGGACTTGT ATTTATCTTTGTGTCAGCCCGAACGATCTCGAAGTCATAGCGCCCTTGATGCGTCTTCTCTTCCAGCAGG TTGTATCAATCCTGCAGCGATCGCTGCCACTTGGAGATGAACGGCACGAAGTTCTGTTTCTCCTCGATGA GTTCAAGCACTTGGGCAAGCTGGAAGCTGTGGAGACGGCAATTACGACGATCGCCGGCTACAAGGGCCGC TTCATGTTTATTATTCAGAGTCTTTCGGCTTTGACAGGAACTTATGATGAAGCTGGTAAGCAAAATTTTC TCAGCAATACGGGTGTGCAGGTATTCATGGCGACTGCTGATGACGAGACGCCCAACTACATTTCCAAAGC TATCGGCGACTACACATTCCAGGCTCGCTCAACGTCGTACAGCCAAGCGCGCATGTTTGATCATAACATC CAAATCTCCGACCAAGGAGCACCGCTTTTGCGCGCCGAACAAGTCCGCCTACTCGACGACGATTATGAAA TAGTCCTTATCAAAGGCCAACCTCCCCTCAAACTGAGAAAAGTGCGATATTATTCGGATCTCATATTGAA GCGAATTTTCGAAAGCCAACACGGTTCCCTTCCCGAGCCCGCATCTTTGATGTTGCCGGGAGACACAAAC CTCGTTGAAGGCAAGCTCGACCAGGGAACAGCCGATACAACTTCGCAAAAGCCGGTGCAGATTGAAGAGA ACGACCATGGGGAAGTCGTTTCCCCCCAAAACAGAACTGTGGCTGATGGAGTAATGCCAATAGAAGTTCG TCCCCGTTCAAACGAAGTTGATGACGAGCGGGAATACCAAGGCGCGGACGCCGCAACCTCTGAGAAGCTT CCGGAAATTGCTCCGGCTCTTTTGGCGCAGCGCGAACTCCTCGACCAGATCATTTCGCTCCAGCTGCGAG GTAGAACAGCTTCCGGCACTTGA |