| Protein ID: 103487969 |
 T4SS name [ID] | Trb [328] |
| Gene symbol | - |
| Locus tag | Sala_2490 |
| Strain | Sphingopyxis alaskensis RB2256 |
| Replicon | chromosome [GenBank: NC_008048] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 2630441..2632330 [-] |
| Product | Type IV secretory pathway VirD4 components-like protein |
| Component type | TraG |
| UniProt ID | Q1GQ75 |
| KEGG ID | sal:Sala_2490 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 5.7e-123, Aligned region: 170..560 TraG-D_C [PF12696], Evalue: 7.6e-19, Aligned region: 420..538 AAA_10 [PF12846], Evalue: 3.6e-18, Aligned region: 184..491 T4SS-DNA_transf [PF02534], Evalue: 3.6e-11, Aligned region: 404..521 DUF87 [PF01935], Evalue: 9.8e-06, Aligned region: 181..227 AAA_16 [PF13191], Evalue: 6.4e-05, Aligned region: 183..347 |
| Protein Sequence: 629 a.a. [Download] |
| >gi|103487969|ref|YP_617530.1| Type IV secretory pathway VirD4 components-like protein [Sphingopyxis alaskensis RB2256] MRDRDQRIHADALRRHWRSNQVRRFKRHAIIFAASIALGGLTLPYLMLTPTTMQATGTWYVARLKTWISS GTEAEPGVMISGGGERYEASARLVAAHPYYRRSADTVIAFFIRGCLLGFIAWLAGLILLRGAMARRRELM LRDRVIGGTIVTTEKKLAQLTRAEAGDHALAIATVPMPPRLETRHMAMVGTTGSGKTTVLRQILDGVEAR GEAALVYDTSGEFVAQYYDPRRGDIILNPFDARCAIWTPFAEIAHPADADRIAQQLITETGQHDRDVWLE TSRILVANMIRALWREGKCTLPDLLHALQVRSKDDLKLWLGNSSSARTFADDADRATGSVLFMLAKAANL IQFLRIDEGKETAFSFRDFLSGLDMHPGPKPWIFVPRKEDYFEASKPLLACWLECAASALLGHSPSAERR LWFILDELADLPRVDNLARLLPEGRKFGAAVILTFQAIGQMRHRYGQDLSESMLGCCNTKLFLQMTDSES RQWASDTIGSCEVELPTMTDALADGDYKPRTTLGRQRKVRPAVLESELRLPRHRGYLLFPDGLPVARIAL TDDHIVRRGKARQLGYVAGDPTTSLWQQSVEAPPVGTPPVEAEPAVQPSTVPPTEPEPPKPQPSGDGPV |
| Nucleotide Sequence: 1890 bp [Download] |
| >gi|103485498|ref|NC_008048.1|:c2632330-2630441 Sphingopyxis alaskensis RB2256 chromosome, complete genome ATGCGCGATCGGGACCAGCGTATCCATGCCGACGCGCTGCGGCGCCACTGGCGATCGAACCAGGTCCGGC GGTTCAAGCGCCATGCGATCATCTTCGCGGCATCGATCGCGCTCGGCGGCCTGACGCTCCCCTATCTGAT GCTGACGCCGACGACGATGCAGGCGACCGGGACCTGGTATGTCGCGCGATTGAAGACGTGGATATCGAGC GGCACCGAAGCCGAACCGGGCGTCATGATCAGCGGTGGAGGAGAGCGCTACGAGGCATCGGCTCGATTGG TCGCGGCGCATCCCTATTATCGCCGGTCGGCCGACACGGTGATTGCCTTCTTCATACGAGGATGCTTGCT GGGGTTCATCGCCTGGCTGGCGGGCCTGATCTTGCTGCGCGGCGCGATGGCACGGCGGCGCGAACTCATG CTTCGCGATCGCGTGATCGGGGGGACGATCGTTACGACCGAGAAGAAGCTCGCGCAGCTGACGCGTGCCG AAGCAGGGGACCATGCCCTGGCCATCGCGACGGTGCCCATGCCGCCACGCCTCGAAACCCGCCACATGGC GATGGTCGGCACGACCGGAAGCGGAAAGACCACGGTGCTGCGTCAGATACTCGATGGCGTCGAGGCGCGC GGCGAGGCGGCGCTCGTCTACGACACGAGCGGTGAGTTCGTCGCCCAATATTATGATCCCCGGCGCGGCG ACATCATCCTAAATCCGTTCGATGCGCGCTGCGCTATTTGGACGCCCTTCGCCGAGATTGCGCATCCGGC GGATGCCGACCGCATCGCGCAGCAGCTTATCACCGAGACCGGACAGCATGATCGCGACGTGTGGCTCGAA ACGAGCCGCATCCTCGTCGCCAACATGATCCGCGCGCTGTGGCGCGAGGGCAAATGCACCCTGCCCGATC TGCTCCATGCATTGCAGGTGCGGTCAAAGGACGATCTCAAGCTATGGCTGGGGAACAGTTCGTCGGCGCG CACCTTCGCTGACGATGCCGACCGCGCGACGGGAAGCGTGCTCTTCATGCTCGCCAAGGCCGCGAACCTC ATCCAGTTCCTGCGCATCGACGAGGGCAAGGAGACGGCCTTTTCTTTCCGCGATTTTTTATCGGGGCTCG ACATGCATCCCGGTCCGAAGCCCTGGATCTTCGTGCCGCGGAAAGAGGATTATTTCGAGGCCTCGAAGCC GCTGCTTGCCTGCTGGCTCGAATGCGCCGCGAGCGCCCTGCTCGGGCATTCGCCCTCGGCCGAGCGCCGC CTCTGGTTCATCCTCGACGAACTCGCCGACCTGCCGCGCGTCGACAATCTCGCGCGGCTGCTACCCGAGG GGCGCAAGTTCGGGGCGGCGGTCATCCTCACCTTTCAGGCGATCGGGCAGATGCGACATCGCTACGGACA GGATTTGTCCGAATCGATGCTCGGCTGCTGCAACACCAAGCTGTTCCTCCAGATGACCGACAGCGAATCC CGGCAATGGGCGAGCGACACCATCGGAAGCTGCGAGGTCGAGCTGCCGACGATGACCGATGCCCTCGCCG ACGGCGACTACAAGCCGCGCACGACGCTCGGCCGCCAGCGCAAGGTCCGGCCCGCCGTCCTCGAGAGCGA ACTGCGCCTTCCCAGGCATCGCGGCTATTTGCTGTTCCCCGATGGATTGCCGGTCGCGCGCATCGCGCTC ACCGACGACCATATCGTGCGGCGCGGCAAGGCGCGCCAGCTCGGATATGTCGCGGGCGATCCCACGACCA GCCTCTGGCAGCAGTCCGTCGAAGCGCCGCCGGTCGGGACACCGCCGGTTGAAGCGGAGCCCGCCGTGCA ACCATCGACGGTGCCGCCCACCGAGCCGGAGCCGCCGAAACCACAGCCGAGCGGCGACGGACCAGTCTGA |