SecReT4

T4SS
References

T4SS ID	328
Strain	Sphingopyxis alaskensis RB2256
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_008048
Location	2615962..2634363
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	0	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	1	1	1

The information of T4SS components from NC_008048

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Sala_2472	2611327..2612226 [-], 900	103487951	phosphoribosylpyrophosphate synthetase
2	Sala_2473	2612223..2613767 [-], 1545	103487952	thymidine phosphorylase
3	Sala_2474	2613764..2615185 [-], 1422	103487953	beta-lactamase-like protein
4	Sala_2475	2615345..2615644 [-], 300	103487954	hypothetical protein
5	Sala_2476	2615744..2615965 [-], 222	103487955	hypothetical protein
6	Sala_2477	2615962..2617143 [-], 1182	103487956	conjugation TrbI-like protein	TrbI
7	Sala_2478	2617173..2618024 [-], 852	103487957	conjugal transfer protein TrbG/VirB9/CagX	TrbG
8	Sala_2479	2618021..2618704 [-], 684	103487958	conjugal transfer protein TrbF	TrbF
9	Sala_2480	2618711..2619991 [-], 1281	103487959	conjugal transfer protein TrbL	TrbL
10	Sala_2481	2619988..2620242 [-], 255	103487960	hypothetical protein
11	Sala_2482	2620244..2620963 [-], 720	103487961	conjugal transfer protein TrbJ	TrbJ
12	Sala_2483	2620969..2623413 [-], 2445	103487962	conjugal transfer ATPase TrbE	TrbE
13	Sala_2484	2623679..2624011 [-], 333	103487963	conjugal transfer protein TrbC	TrbC
14	Sala_2485	2624008..2624991 [-], 984	103487964	type II secretion system protein E	TrbB
15	Sala_2486	2625126..2625701 [+], 576	103487965	LuxR family transcriptional regulator
16	Sala_2487	2625761..2626093 [+], 333	103487966	hypothetical protein
17	Sala_2488	2626482..2627546 [+], 1065	103487967	DNA repair protein RadC
18	Sala_2489	2627631..2630441 [-], 2811	103487968	TrwC protein
19	Sala_2490	2630441..2632330 [-], 1890	103487969	Type IV secretory pathway VirD4 components-like protein	TraG
20	Sala_2491	2632330..2632827 [-], 498	103487970	hypothetical protein
21	Sala_2492	2633048..2633776 [-], 729	103487971	lytic transglycosylase, catalytic	TrbN
22	Sala_2493	2633773..2634363 [-], 591	103487972	conjugal transfer protein traF	TraF
23	Sala_2494	2634360..2634905 [-], 546	103487973	hypothetical protein
24	Sala_2495	2634905..2635147 [-], 243	103487974	putative transcriptional regulator
25	Sala_2496	2635250..2635759 [-], 510	103487975	hypothetical protein
26	Sala_2497	2636150..2636464 [-], 315	103487976	hypothetical protein
27	Sala_2498	2636775..2637245 [-], 471	103487977	hypothetical protein
28	Sala_2499	2637330..2637572 [-], 243	103487978	hypothetical protein
29	Sala_2500	2637612..2637914 [-], 303	103487979	hypothetical protein
30	Sala_2501	2637963..2638283 [-], 321	103487980	hypothetical protein
31	Sala_2502	2638892..2639146 [-], 255	103487981	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_008048