Detailed information NTG0996850

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABDZ19_RS10565
• Genome accession: NZ_CP155476
• Coordinates: 2196636..2197337 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2024CK-00247
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2191636..2202337

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABDZ19_RS10535 (ABDZ19_10535)	-	2191943..2192386 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABDZ19_RS10540 (ABDZ19_10540)	tadA	2192455..2192958 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABDZ19_RS10545 (ABDZ19_10545)	-	2192965..2194089 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABDZ19_RS10550 (ABDZ19_10550)	ung	2194086..2194799 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABDZ19_RS10555 (ABDZ19_10555)	-	2194850..2195446 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABDZ19_RS10560 (ABDZ19_10560)	gspK	2195677..2196636 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABDZ19_RS10565 (ABDZ19_10565)	xcpW	2196636..2197337 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABDZ19_RS10570 (ABDZ19_10570)	xcpV	2197337..2197717 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABDZ19_RS10575 (ABDZ19_10575)	-	2197707..2198261 (-)	555	WP_000841373.1	type II secretion system protein	-
ABDZ19_RS10580 (ABDZ19_10580)	-	2198271..2198879 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABDZ19_RS10585 (ABDZ19_10585)	-	2198917..2199690 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABDZ19_RS10590 (ABDZ19_10590)	-	2199708..2200049 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABDZ19_RS10595 (ABDZ19_10595)	-	2200061..2201041 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABDZ19_RS10600 (ABDZ19_10600)	kdsB	2201053..2201814 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=996850 ABDZ19_RS10565 WP_000594589.1 2196636..2197337(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00247]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=996850 ABDZ19_RS10565 WP_000594589.1 2196636..2197337(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00247]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996