Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ABDE97_RS17775 | Genome accession | NZ_CP155455 |
| Coordinates | 3673117..3673590 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214065.1 | Uniprot ID | N9K1Q3 |
| Organism | Acinetobacter baumannii strain 2024CK-00278 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3668117..3678590
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABDE97_RS17760 (ABDE97_17740) | pilX | 3670746..3671564 (-) | 819 | WP_281717928.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ABDE97_RS17765 (ABDE97_17745) | pilW | 3671561..3672562 (-) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| ABDE97_RS17770 (ABDE97_17750) | pilV | 3672563..3673123 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ABDE97_RS17775 (ABDE97_17755) | fimU | 3673117..3673590 (-) | 474 | WP_001214065.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ABDE97_RS17780 (ABDE97_17760) | ispH | 3673760..3674710 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ABDE97_RS17785 (ABDE97_17765) | gmk | 3674833..3675462 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| ABDE97_RS17790 (ABDE97_17770) | rpoZ | 3675535..3675813 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ABDE97_RS17795 (ABDE97_17775) | - | 3675852..3675981 (+) | 130 | Protein_3475 | hypothetical protein | - |
| ABDE97_RS17800 (ABDE97_17780) | - | 3676021..3678126 (+) | 2106 | WP_001117589.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.43 Da Isoelectric Point: 8.5355
>NTDB_id=996440 ABDE97_RS17775 WP_001214065.1 3673117..3673590(-) (fimU) [Acinetobacter baumannii strain 2024CK-00278]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=996440 ABDE97_RS17775 WP_001214065.1 3673117..3673590(-) (fimU) [Acinetobacter baumannii strain 2024CK-00278]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTGGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTGGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |