Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | AAVC94_RS05205 | Genome accession | NZ_CP154906 |
| Coordinates | 1052065..1052643 (+) | Length | 192 a.a. |
| NCBI ID | WP_003212419.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain FUA2115 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1047065..1057643
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVC94_RS05185 (AAVC94_05185) | - | 1047557..1048852 (-) | 1296 | WP_253622759.1 | globin-coupled sensor protein | - |
| AAVC94_RS05190 (AAVC94_05190) | - | 1048944..1050476 (-) | 1533 | WP_253622758.1 | FAD-dependent oxidoreductase | - |
| AAVC94_RS05195 (AAVC94_05195) | - | 1050622..1051482 (+) | 861 | WP_050945379.1 | SDR family oxidoreductase | - |
| AAVC94_RS05200 (AAVC94_05200) | - | 1051546..1051776 (-) | 231 | WP_003210924.1 | IDEAL domain-containing protein | - |
| AAVC94_RS05205 (AAVC94_05205) | comK | 1052065..1052643 (+) | 579 | WP_003212419.1 | competence protein ComK | Regulator |
| AAVC94_RS05210 (AAVC94_05210) | - | 1052802..1053908 (+) | 1107 | WP_226804969.1 | D-TA family PLP-dependent enzyme | - |
| AAVC94_RS05215 (AAVC94_05215) | - | 1054226..1054708 (+) | 483 | WP_050945375.1 | hypothetical protein | - |
| AAVC94_RS05220 (AAVC94_05220) | - | 1054740..1056179 (-) | 1440 | WP_050945373.1 | PLP-dependent aminotransferase family protein | - |
| AAVC94_RS05225 (AAVC94_05225) | - | 1056324..1057493 (+) | 1170 | WP_253622757.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22376.45 Da Isoelectric Point: 8.7996
>NTDB_id=995048 AAVC94_RS05205 WP_003212419.1 1052065..1052643(+) (comK) [Bacillus pumilus strain FUA2115]
MSGISETPLDSYVINQTTMAILPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQTTMAILPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=995048 AAVC94_RS05205 WP_003212419.1 1052065..1052643(+) (comK) [Bacillus pumilus strain FUA2115]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGATCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAACCTCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCCCACAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGGAACAGATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGATCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAACCTCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCCCACAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGGAACAGATATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
60.938 |
100 |
0.609 |