Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSS96_RS05060 Genome accession   NZ_CP151980
Coordinates   1002462..1003412 (+) Length   316 a.a.
NCBI ID   WP_041117046.1    Uniprot ID   -
Organism   Bacillus sp. FSL W7-1336     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 997462..1008412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS96_RS05035 (NSS96_05035) comK 997815..998393 (+) 579 WP_034282183.1 competence protein ComK Regulator
  NSS96_RS05040 (NSS96_05040) - 998692..999174 (+) 483 WP_034282182.1 hypothetical protein -
  NSS96_RS05045 (NSS96_05045) - 999206..1000645 (-) 1440 WP_034282181.1 PLP-dependent aminotransferase family protein -
  NSS96_RS05050 (NSS96_05050) - 1000791..1001960 (+) 1170 WP_034282180.1 MFS transporter -
  NSS96_RS05055 (NSS96_05055) - 1002026..1002301 (+) 276 WP_034282178.1 barstar family protein -
  NSS96_RS05060 (NSS96_05060) ceuB 1002462..1003412 (+) 951 WP_041117046.1 ABC transporter permease Machinery gene
  NSS96_RS05065 (NSS96_05065) - 1003405..1004355 (+) 951 WP_098676789.1 iron chelate uptake ABC transporter family permease subunit -
  NSS96_RS05070 (NSS96_05070) - 1004346..1005104 (+) 759 WP_034282171.1 ATP-binding cassette domain-containing protein -
  NSS96_RS05075 (NSS96_05075) - 1005126..1006070 (+) 945 WP_098676790.1 siderophore ABC transporter substrate-binding protein -
  NSS96_RS05080 (NSS96_05080) - 1006210..1007163 (+) 954 WP_034282168.1 LCP family protein -
  NSS96_RS05085 (NSS96_05085) - 1007232..1007594 (-) 363 WP_034282166.1 hypothetical protein -
  NSS96_RS05090 (NSS96_05090) - 1007751..1008368 (+) 618 WP_098676791.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34905.23 Da        Isoelectric Point: 9.6338

>NTDB_id=983169 NSS96_RS05060 WP_041117046.1 1002462..1003412(+) (ceuB) [Bacillus sp. FSL W7-1336]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=983169 NSS96_RS05060 WP_041117046.1 1002462..1003412(+) (ceuB) [Bacillus sp. FSL W7-1336]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGCGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAATGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCGGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491

Multiple sequence alignment