Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   AADZ70_RS16715 Genome accession   NZ_CP151679
Coordinates   3314405..3314569 (+) Length   54 a.a.
NCBI ID   WP_277814035.1    Uniprot ID   -
Organism   Bacillus sp. YBsi01     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3309405..3319569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADZ70_RS16710 (AADZ70_16710) srfAB 3311350..3314340 (+) 2991 Protein_3237 surfactin non-ribosomal peptide synthetase SrfAB -
  AADZ70_RS16715 (AADZ70_16715) comS 3314405..3314569 (+) 165 WP_277814035.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6162.16 Da        Isoelectric Point: 11.8141

>NTDB_id=979722 AADZ70_RS16715 WP_277814035.1 3314405..3314569(+) (comS) [Bacillus sp. YBsi01]
MRVRRSSSLNRSGKHLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=979722 AADZ70_RS16715 WP_277814035.1 3314405..3314569(+) (comS) [Bacillus sp. YBsi01]
ATGAGAGTGAGGAGGAGCAGCAGTTTGAACCGATCCGGCAAGCACCTCATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

63.043

85.185

0.537

Multiple sequence alignment