Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | WOC63_RS09375 | Genome accession | NZ_CP150765 |
| Coordinates | 1928478..1928777 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain TUM20963 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1923478..1933777
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC63_RS09350 (WOC63_09345) | gcvPA | 1924690..1926036 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| WOC63_RS09355 (WOC63_09350) | gcvT | 1926056..1927147 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| WOC63_RS09360 (WOC63_09355) | - | 1927306..1927830 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| WOC63_RS09365 (WOC63_09360) | - | 1927820..1927966 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| WOC63_RS09370 (WOC63_09365) | comGF | 1928063..1928560 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| WOC63_RS09375 (WOC63_09370) | comGE | 1928478..1928777 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| WOC63_RS09380 (WOC63_09375) | comGD | 1928764..1929210 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| WOC63_RS09385 (WOC63_09380) | comGC | 1929188..1929499 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| WOC63_RS09390 (WOC63_09385) | comGB | 1929513..1930583 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| WOC63_RS09395 (WOC63_09390) | comGA | 1930555..1931529 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| WOC63_RS09400 (WOC63_09395) | - | 1931581..1932204 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| WOC63_RS09405 (WOC63_09400) | - | 1932201..1932530 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| WOC63_RS09410 (WOC63_09405) | - | 1932530..1933516 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| WOC63_RS09415 (WOC63_09410) | - | 1933513..1933716 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=972138 WOC63_RS09375 WP_000844413.1 1928478..1928777(-) (comGE) [Staphylococcus aureus strain TUM20963]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=972138 WOC63_RS09375 WP_000844413.1 1928478..1928777(-) (comGE) [Staphylococcus aureus strain TUM20963]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |