Detailed information NTG0953384

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: WHP78_RS04000
• Genome accession: NZ_CP148250
• Coordinates: 764486..765217 (-)
• Length: 243 a.a.
• NCBI ID: WP_002855729.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323CCJ0008
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 759486..770217

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP78_RS03960 (WHP78_03960)	-	759600..760361 (+)	762	WP_002856328.1	ATP-binding protein	-
WHP78_RS03965 (WHP78_03965)	-	760358..761044 (+)	687	WP_002877763.1	endonuclease III domain-containing protein	-
WHP78_RS03970 (WHP78_03970)	thiD	761041..761853 (+)	813	WP_002877760.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
WHP78_RS03975 (WHP78_03975)	thiE	761843..762475 (+)	633	WP_002877759.1	thiamine phosphate synthase	-
WHP78_RS03980 (WHP78_03980)	hemD	762453..763082 (+)	630	WP_002877758.1	uroporphyrinogen-III synthase	-
WHP78_RS03985 (WHP78_03985)	-	763079..763531 (-)	453	WP_002877757.1	hypothetical protein	-
WHP78_RS03990 (WHP78_03990)	-	763528..764190 (-)	663	WP_002877751.1	hypothetical protein	-
WHP78_RS03995 (WHP78_03995)	ctsT	764187..764489 (-)	303	WP_002877750.1	hypothetical protein	Machinery gene
WHP78_RS04000 (WHP78_04000)	proC	764486..765217 (-)	732	WP_002855729.1	pyrroline-5-carboxylate reductase	Machinery gene
WHP78_RS04005 (WHP78_04005)	fliW	765217..765606 (-)	390	WP_002877749.1	flagellar assembly protein FliW	-
WHP78_RS04010 (WHP78_04010)	-	765767..766414 (+)	648	WP_002877748.1	outer membrane protein assembly factor BamD	-
WHP78_RS04015 (WHP78_04015)	lon	766431..768806 (+)	2376	WP_002868636.1	endopeptidase La	-
WHP78_RS04020 (WHP78_04020)	rpsR	768867..769127 (-)	261	WP_002853032.1	30S ribosomal protein S18	-
WHP78_RS04025 (WHP78_04025)	ssb	769138..769689 (-)	552	WP_002877747.1	single-stranded DNA-binding protein	-
WHP78_RS04030 (WHP78_04030)	rpsF	769698..770075 (-)	378	WP_002812868.1	30S ribosomal protein S6	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26592.01 Da
• Isoelectric Point: 8.5934

>NTDB_id=953384 WHP78_RS04000 WP_002855729.1 764486..765217(-) (proC) [Campylobacter jejuni strain Z1323CCJ0008]
MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALTKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIMPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=953384 WHP78_RS04000 WP_002855729.1 764486..765217(-) (proC) [Campylobacter jejuni strain Z1323CCJ0008]
ATGCTCTATATACTTGCAAATGGAGCTATGGCAACAGCCTTAGCCTATGGATTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCACCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTGGCTTTCAAACCTTATGCTTTAGAAAATATTGCCCAAATGCTAAAAGGACAAGCACGCATCTTA
ATCTCTGTTTTAGCTAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATGCCTAATAC
AGCAGCTAAATATAAGGCTTCAACTACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGTATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATCATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	99.177	100	0.992