Detailed information NTG0953181

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: WHQ28_RS05220
• Genome accession: NZ_CP148233
• Coordinates: 1006219..1006950 (+)
• Length: 243 a.a.
• NCBI ID: WP_002869050.1
• Uniprot ID: A0A5T0SGW6
• Organism: Campylobacter jejuni strain Z1323CCJ0027
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1001219..1011950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHQ28_RS05190 (WHQ28_05190)	rpsF	1001365..1001739 (+)	375	WP_002890070.1	30S ribosomal protein S6	-
WHQ28_RS05195 (WHQ28_05195)	ssb	1001751..1002299 (+)	549	WP_002890071.1	single-stranded DNA-binding protein	-
WHQ28_RS05200 (WHQ28_05200)	rpsR	1002310..1002570 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
WHQ28_RS05205 (WHQ28_05205)	lon	1002630..1005005 (-)	2376	WP_002853487.1	endopeptidase La	-
WHQ28_RS05210 (WHQ28_05210)	-	1005022..1005669 (-)	648	WP_002852961.1	outer membrane protein assembly factor BamD	-
WHQ28_RS05215 (WHQ28_05215)	fliW	1005830..1006219 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
WHQ28_RS05220 (WHQ28_05220)	proC	1006219..1006950 (+)	732	WP_002869050.1	pyrroline-5-carboxylate reductase	Machinery gene
WHQ28_RS05225 (WHQ28_05225)	ctsT	1006947..1007249 (+)	303	WP_002855822.1	transformation system protein	Machinery gene
WHQ28_RS05230 (WHQ28_05230)	-	1007246..1007908 (+)	663	WP_002866103.1	hypothetical protein	-
WHQ28_RS05235 (WHQ28_05235)	-	1007905..1008357 (+)	453	WP_002869049.1	hypothetical protein	-
WHQ28_RS05240 (WHQ28_05240)	hemD	1008354..1008983 (-)	630	WP_002856298.1	uroporphyrinogen-III synthase	-
WHQ28_RS05245 (WHQ28_05245)	thiE	1008961..1009593 (-)	633	WP_002856400.1	thiamine phosphate synthase	-
WHQ28_RS05250 (WHQ28_05250)	thiD	1009583..1010395 (-)	813	WP_002869047.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
WHQ28_RS05255 (WHQ28_05255)	-	1010392..1011078 (-)	687	WP_002869046.1	3-methyladenine DNA glycosylase	-
WHQ28_RS05260 (WHQ28_05260)	-	1011075..1011836 (-)	762	WP_002856328.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26543.96 Da
• Isoelectric Point: 8.5934

>NTDB_id=953181 WHQ28_RS05220 WP_002869050.1 1006219..1006950(+) (proC) [Campylobacter jejuni strain Z1323CCJ0027]
MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=953181 WHQ28_RS05220 WP_002869050.1 1006219..1006950(+) (proC) [Campylobacter jejuni strain Z1323CCJ0027]
ATGCTCTATATACTTGCAAATGGAGCTATGGCAACAGCCTTAGCCTATGGATTAAAAGATGATTATGAAATTTGCATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCAGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

3D structure

• AlphaFold DB: A0A5T0SGW6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	100	100	1