Detailed information NTG0952480

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHQ29_RS04990
• Genome accession: NZ_CP148190
• Coordinates: 961779..962738 (-)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323CCJ0080
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 956779..967738

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHQ29_RS04960 (WHQ29_04960)	ccoS	957736..957942 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
WHQ29_RS04965 (WHQ29_04965)	-	957965..958267 (-)	303	WP_002852762.1	cytochrome c	-
WHQ29_RS04970 (WHQ29_04970)	gmhB	958349..958909 (+)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHQ29_RS04975 (WHQ29_04975)	rfaD	958910..959863 (+)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
WHQ29_RS04980 (WHQ29_04980)	rfaE1	959856..961241 (+)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHQ29_RS04985 (WHQ29_04985)	gmhA	961238..961798 (+)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
WHQ29_RS04990 (WHQ29_04990)	waaF	961779..962738 (-)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
WHQ29_RS04995 (WHQ29_04995)	waaV	962797..963621 (+)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
WHQ29_RS05000 (WHQ29_05000)	-	963605..964457 (+)	853	Protein_968	glycosyltransferase	-
WHQ29_RS05005 (WHQ29_05005)	-	964452..965114 (-)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
WHQ29_RS05010 (WHQ29_05010)	-	965148..966062 (-)	915	Protein_970	beta-1,4-N-acetylgalactosaminyltransferase	-
WHQ29_RS05015 (WHQ29_05015)	neuC	966059..967174 (-)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=952480 WHQ29_RS04990 WP_002875425.1 961779..962738(-) (waaF) [Campylobacter jejuni strain Z1323CCJ0080]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=952480 WHQ29_RS04990 WP_002875425.1 961779..962738(-) (waaF) [Campylobacter jejuni strain Z1323CCJ0080]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1