Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | WHQ13_RS02505 | Genome accession | NZ_CP148185 |
| Coordinates | 472313..472963 (-) | Length | 216 a.a. |
| NCBI ID | WP_032593192.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain Z1323CCJ0087 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 462489..489953 | 472313..472963 | within | 0 |
Gene organization within MGE regions
Location: 462489..489953
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ13_RS02420 (WHQ13_02420) | - | 462489..463691 (+) | 1203 | WP_032593176.1 | site-specific integrase | - |
| WHQ13_RS02425 (WHQ13_02425) | - | 463688..463858 (-) | 171 | WP_002864902.1 | helix-turn-helix domain-containing protein | - |
| WHQ13_RS02430 (WHQ13_02430) | - | 463851..464393 (-) | 543 | WP_032593178.1 | pentapeptide repeat-containing protein | - |
| WHQ13_RS02435 (WHQ13_02435) | - | 464381..464587 (-) | 207 | WP_032593181.1 | hypothetical protein | - |
| WHQ13_RS02440 (WHQ13_02440) | - | 464584..465270 (-) | 687 | WP_032593184.1 | hypothetical protein | - |
| WHQ13_RS02445 (WHQ13_02445) | - | 465273..465692 (-) | 420 | WP_032593187.1 | YopX family protein | - |
| WHQ13_RS02450 (WHQ13_02450) | - | 465725..466297 (-) | 573 | WP_050460521.1 | antA/AntB antirepressor family protein | - |
| WHQ13_RS02455 (WHQ13_02455) | - | 466485..466748 (-) | 264 | WP_011049695.1 | hypothetical protein | - |
| WHQ13_RS02460 (WHQ13_02460) | - | 466729..467424 (-) | 696 | WP_011049696.1 | hypothetical protein | - |
| WHQ13_RS02465 (WHQ13_02465) | - | 467424..468161 (-) | 738 | WP_002873576.1 | hypothetical protein | - |
| WHQ13_RS02470 (WHQ13_02470) | - | 468163..469017 (-) | 855 | WP_338877936.1 | YqaJ viral recombinase family protein | - |
| WHQ13_RS02475 (WHQ13_02475) | - | 469019..469246 (-) | 228 | WP_002874355.1 | helix-turn-helix domain-containing protein | - |
| WHQ13_RS02480 (WHQ13_02480) | - | 469237..469494 (-) | 258 | WP_002865124.1 | hypothetical protein | - |
| WHQ13_RS02485 (WHQ13_02485) | - | 469485..469754 (-) | 270 | WP_002874357.1 | hypothetical protein | - |
| WHQ13_RS02490 (WHQ13_02490) | - | 470315..470587 (-) | 273 | WP_032593190.1 | hypothetical protein | - |
| WHQ13_RS02495 (WHQ13_02495) | - | 470731..471462 (+) | 732 | WP_002861653.1 | hypothetical protein | - |
| WHQ13_RS02500 (WHQ13_02500) | - | 471496..472320 (-) | 825 | WP_002874362.1 | hypothetical protein | - |
| WHQ13_RS02505 (WHQ13_02505) | CJE0566 | 472313..472963 (-) | 651 | WP_032593192.1 | DNA/RNA non-specific endonuclease | Regulator |
| WHQ13_RS02510 (WHQ13_02510) | - | 472979..473476 (-) | 498 | WP_032593193.1 | hypothetical protein | - |
| WHQ13_RS02515 (WHQ13_02515) | - | 473469..474674 (-) | 1206 | WP_032593196.1 | AAA family ATPase | - |
| WHQ13_RS02520 (WHQ13_02520) | - | 474777..475511 (-) | 735 | WP_032593197.1 | S24 family peptidase | - |
| WHQ13_RS02525 (WHQ13_02525) | - | 475623..475841 (+) | 219 | WP_002826741.1 | hypothetical protein | - |
| WHQ13_RS02530 (WHQ13_02530) | - | 475838..476272 (+) | 435 | WP_002826742.1 | hypothetical protein | - |
| WHQ13_RS02535 (WHQ13_02535) | - | 476269..476646 (+) | 378 | WP_002826744.1 | hypothetical protein | - |
| WHQ13_RS02540 (WHQ13_02540) | - | 476643..477644 (+) | 1002 | WP_032593200.1 | hypothetical protein | - |
| WHQ13_RS02545 (WHQ13_02545) | - | 477655..478305 (+) | 651 | WP_338877891.1 | hypothetical protein | - |
| WHQ13_RS02550 (WHQ13_02550) | - | 478323..478703 (+) | 381 | WP_002788333.1 | hypothetical protein | - |
| WHQ13_RS02555 (WHQ13_02555) | - | 478703..479089 (+) | 387 | WP_002861661.1 | terminase small subunit | - |
| WHQ13_RS02560 (WHQ13_02560) | - | 479086..480378 (+) | 1293 | WP_032593205.1 | terminase | - |
| WHQ13_RS02565 (WHQ13_02565) | - | 480368..480640 (+) | 273 | WP_002781524.1 | hypothetical protein | - |
| WHQ13_RS02570 (WHQ13_02570) | - | 480621..482159 (+) | 1539 | WP_032593207.1 | hypothetical protein | - |
| WHQ13_RS02575 (WHQ13_02575) | - | 482152..482355 (+) | 204 | WP_002875072.1 | hypothetical protein | - |
| WHQ13_RS02580 (WHQ13_02580) | - | 482345..482992 (+) | 648 | WP_002875073.1 | hypothetical protein | - |
| WHQ13_RS02585 (WHQ13_02585) | - | 483003..483383 (+) | 381 | WP_032593208.1 | hypothetical protein | - |
| WHQ13_RS02590 (WHQ13_02590) | - | 483648..484859 (+) | 1212 | WP_011049716.1 | hypothetical protein | - |
| WHQ13_RS02595 (WHQ13_02595) | - | 484859..488539 (+) | 3681 | WP_338878216.1 | PBECR2 nuclease fold domain-containing protein | - |
| WHQ13_RS02600 (WHQ13_02600) | - | 488919..489953 (+) | 1035 | WP_002874378.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 25364.97 Da Isoelectric Point: 9.9933
>NTDB_id=952439 WHQ13_RS02505 WP_032593192.1 472313..472963(-) (CJE0566) [Campylobacter jejuni strain Z1323CCJ0087]
MKKLIILSLLTTLALADYNQYKPSEDFAKHFTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG
MKKLIILSLLTTLALADYNQYKPSEDFAKHFTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG
Nucleotide
Download Length: 651 bp
>NTDB_id=952439 WHQ13_RS02505 WP_032593192.1 472313..472963(-) (CJE0566) [Campylobacter jejuni strain Z1323CCJ0087]
ATGAAAAAACTTATAATCTTATCATTATTGACAACTCTAGCCTTAGCTGATTATAACCAATACAAACCAAGTGAAGATTT
TGCTAAGCATTTTACTAAGCAAAACTGCTCACAAGTTTTGGATAAGTTTTATTATCTAAATTGTTATGATTATAATCTTA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGGATAA
ATGAAAAAACTTATAATCTTATCATTATTGACAACTCTAGCCTTAGCTGATTATAACCAATACAAACCAAGTGAAGATTT
TGCTAAGCATTTTACTAAGCAAAACTGCTCACAAGTTTTGGATAAGTTTTATTATCTAAATTGTTATGATTATAATCTTA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
87.442 |
99.537 |
0.87 |
| CJE1441 | Campylobacter jejuni RM1221 |
86.977 |
99.537 |
0.866 |