Detailed information NTG0918602

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VNN32_RS09365
• Genome accession: NZ_CP141703
• Coordinates: 1804242..1805111 (+)
• Length: 289 a.a.
• NCBI ID: WP_046401191.1
• Uniprot ID: -
• Organism: Lactococcus petauri strain R21-74 AL-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1799242..1810111

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN32_RS09345 (VNN32_09340)	-	1799569..1800189 (+)	621	WP_019291676.1	GntR family transcriptional regulator	-
VNN32_RS09350 (VNN32_09345)	-	1800394..1801596 (+)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
VNN32_RS09355 (VNN32_09350)	-	1801589..1803313 (+)	1725	WP_206887366.1	ABC transporter permease/substrate binding protein	-
VNN32_RS09360 (VNN32_09355)	budA	1803457..1804155 (+)	699	WP_046401190.1	acetolactate decarboxylase	-
VNN32_RS09365 (VNN32_09360)	dprA	1804242..1805111 (+)	870	WP_046401191.1	DNA-processing protein DprA	Machinery gene
VNN32_RS09370 (VNN32_09365)	topA	1805300..1807450 (+)	2151	WP_046401192.1	type I DNA topoisomerase	-
VNN32_RS09375 (VNN32_09370)	trmFO	1807499..1808842 (+)	1344	WP_046401193.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
VNN32_RS09380 (VNN32_09375)	-	1808916..1809137 (-)	222	WP_019292266.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32887.14 Da
• Isoelectric Point: 9.9003

>NTDB_id=918602 VNN32_RS09365 WP_046401191.1 1804242..1805111(+) (dprA) [Lactococcus petauri strain R21-74 AL-1]
MIKNFEILRLKKAGMSNLGILKLIDYQRRHEAKLTLRQLARIAEVKTVPNFIESYKSQDVKRLREQYKIFPSFSILDDIY
PEWLRETYNPPALLFYRGDLKLLSLPKLGFVGSREMSKEAPRIIHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYLKENRKLQEYLAAHELVLSEYLVGEQPLKFHFPERNRIIAGLSRGVVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLYEGNFFP

Nucleotide

• Length: 870 bp

>NTDB_id=918602 VNN32_RS09365 WP_046401191.1 1804242..1805111(+) (dprA) [Lactococcus petauri strain R21-74 AL-1]
ATGATTAAAAACTTTGAAATATTACGTTTAAAAAAAGCAGGAATGTCTAATTTAGGGATTTTGAAACTGATTGATTATCA
GAGGAGGCATGAAGCAAAACTCACTCTACGCCAGTTAGCGCGGATTGCAGAGGTCAAAACTGTCCCTAATTTTATTGAGA
GTTATAAGAGTCAAGATGTGAAACGACTTCGTGAGCAATACAAAATTTTCCCCTCCTTTTCCATTTTAGATGACATTTAT
CCCGAATGGCTGAGAGAAACATATAATCCGCCTGCCCTCCTTTTTTACCGAGGAGATCTTAAATTGCTTAGTCTTCCTAA
ACTTGGGTTTGTAGGTAGTCGTGAAATGTCTAAGGAAGCACCAAGAATAATCCATAAGCTTATTGAGGAATTAAAGCAAA
ACTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACCTCAAGCCATGTAGCAGCTGTAAAACAAAAAACTCCAACC
ATTGCTGTCATTGGTAATGGGTTAGATATTAGTTATCTAAAAGAAAATCGTAAATTACAAGAATACTTAGCAGCACATGA
ATTAGTTTTATCAGAATACCTTGTAGGAGAGCAACCCCTCAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCTGGTC
TTTCCCGTGGTGTTGTTGTTGTGGAAGCAAAACAACGTAGTGGTAGCCTTATCACAAGTCGTTATGCTTTAGAGGGTAAT
AGAGAAGTTTTTGCTGTACCTGGAGATATTTTGAATAGAAATGCTTCTGGCTGTAATCAATTAATCCAACAAGGTGCAGC
CAAGCTTGTCACTCATGGACAAGATATTTTAGATGAATTTTATTTATATGAAGGGAATTTCTTTCCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.604	97.924	0.623
dprA	Streptococcus mutans UA159	55.197	96.54	0.533
dprA/cilB/dalA	Streptococcus mitis SK321	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.405	96.54	0.516
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	52.688	96.54	0.509
dprA	Latilactobacillus sakei subsp. sakei 23K	38.909	95.156	0.37