Detailed information NTG0895875

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R4712_RS06265
• Genome accession: NZ_CP137110
• Coordinates: 1242678..1243082 (+)
• Length: 134 a.a.
• NCBI ID: WP_288176807.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 16H2041
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1237678..1248082

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4712_RS06240	-	1238802..1239860 (+)	1059	WP_044812807.1	zinc-dependent alcohol dehydrogenase family protein	-
R4712_RS06245	-	1240011..1240376 (+)	366	WP_000286415.1	DUF1033 family protein	-
R4712_RS06250	comGA/cglA/cilD	1240452..1241393 (+)	942	WP_016398028.1	competence type IV pilus ATPase ComGA	Machinery gene
R4712_RS06255	comGB/cglB	1241341..1242357 (+)	1017	WP_074196785.1	competence type IV pilus assembly protein ComGB	Machinery gene
R4712_RS06260	comGC/cglC	1242359..1242685 (+)	327	WP_000738626.1	comG operon protein ComGC	Machinery gene
R4712_RS06265	comGD/cglD	1242678..1243082 (+)	405	WP_288176807.1	competence type IV pilus minor pilin ComGD	Machinery gene
R4712_RS06270	comGE/cglE	1243045..1243347 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R4712_RS06275	comGF/cglF	1243310..1243771 (+)	462	WP_001864569.1	competence type IV pilus minor pilin ComGF	Machinery gene
R4712_RS06280	comGG/cglG	1243749..1244162 (+)	414	WP_001864570.1	competence type IV pilus minor pilin ComGG	Machinery gene
R4712_RS06285	-	1244299..1244893 (+)	595	Protein_1230	class I SAM-dependent methyltransferase	-
R4712_RS06290	comYH	1244954..1245907 (+)	954	WP_001866278.1	class I SAM-dependent methyltransferase	Machinery gene
R4712_RS06295	-	1245958..1247148 (+)	1191	WP_000167766.1	acetate kinase	-
R4712_RS06300	-	1247149..1247280 (+)	132	WP_000768904.1	hypothetical protein	-
R4712_RS06305	rnpA	1247297..1247668 (+)	372	WP_000739246.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14680.92 Da
• Isoelectric Point: 10.2164

>NTDB_id=895875 R4712_RS06265 WP_288176807.1 1242678..1243082(+) (comGD/cglD) [Streptococcus pneumoniae strain 16H2041]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQMISNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=895875 R4712_RS06265 WP_288176807.1 1242678..1243082(+) (comGD/cglD) [Streptococcus pneumoniae strain 16H2041]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTTCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATGATTAGCAATGGCAGTCAAAAGTTGCCAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae D39	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae R6	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae Rx1	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.843	94.776	0.567
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47