Detailed information NTG0892747

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: RYQ61_RS08740
• Genome accession: NZ_CP136799
• Coordinates: 1733701..1734543 (-)
• Length: 280 a.a.
• NCBI ID: WP_048786527.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain XH2169
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1728701..1739543

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RYQ61_RS08725 (RYQ61_08725)	trmFO	1729544..1730878 (-)	1335	WP_102568001.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
RYQ61_RS08730 (RYQ61_08730)	-	1730972..1731466 (-)	495	WP_102568000.1	phosphoribosylanthranilate isomerase	-
RYQ61_RS08735 (RYQ61_08735)	topA	1731522..1733615 (-)	2094	WP_117276808.1	type I DNA topoisomerase	-
RYQ61_RS08740 (RYQ61_08740)	dprA/cilB/dalA	1733701..1734543 (-)	843	WP_048786527.1	DNA-processing protein DprA	Machinery gene
RYQ61_RS08745 (RYQ61_08745)	-	1734626..1735024 (-)	399	Protein_1677	sugar O-acetyltransferase	-
RYQ61_RS08750 (RYQ61_08750)	-	1735066..1735842 (-)	777	WP_102567999.1	ribonuclease HII	-
RYQ61_RS08755 (RYQ61_08755)	ylqF	1735829..1736680 (-)	852	WP_102567998.1	ribosome biogenesis GTPase YlqF	-
RYQ61_RS08760 (RYQ61_08760)	rpsU	1737084..1737260 (-)	177	WP_000048054.1	30S ribosomal protein S21	-
RYQ61_RS08765 (RYQ61_08765)	-	1737409..1737747 (-)	339	WP_003072637.1	ATP cone domain-containing protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31163.65 Da
• Isoelectric Point: 5.4063

>NTDB_id=892747 RYQ61_RS08740 WP_048786527.1 1733701..1734543(-) (dprA/cilB/dalA) [Streptococcus intermedius strain XH2169]
MNNFDIYKLKEAGLTNQQVINVLEYAEIHEKDLSAKDMAVVSECRNPALFIEKYLQLDDDLLRQEFEKFPSFSILDDVYP
WDLSEIYNPPVLLFYKGNLDLLKLPKVAVVGSRNSSRVGSQSVQKIIKELNNELVIVSGLARGIDTSAHMAALQNGGRTI
AVIGTGLDVFYPRANKKLQSYLGEHHLVLSEYGSEAEPLKFHFPERNRIIAGLCRGVIVAEAKMRSGSLITCERAMEEGR
DVFAIPGSILDGRSDGCHHLIQEGAKCITSGSDVLSEFQF

Nucleotide

• Length: 843 bp

>NTDB_id=892747 RYQ61_RS08740 WP_048786527.1 1733701..1734543(-) (dprA/cilB/dalA) [Streptococcus intermedius strain XH2169]
ATGAATAATTTTGATATTTATAAATTAAAAGAAGCCGGCTTGACAAACCAACAAGTTATCAATGTATTAGAATATGCTGA
AATACATGAAAAAGATTTGTCTGCTAAAGACATGGCAGTTGTTTCCGAATGCCGTAATCCTGCTCTTTTTATTGAAAAAT
ATTTGCAGTTAGATGATGATTTATTACGTCAAGAATTTGAGAAATTCCCATCCTTTTCTATCTTGGACGATGTATATCCT
TGGGATTTGAGTGAAATTTATAATCCACCCGTTCTTCTTTTTTATAAAGGTAATTTGGATTTGCTAAAATTACCTAAAGT
GGCTGTTGTAGGAAGTCGGAATAGTAGCCGAGTAGGCAGTCAATCTGTTCAAAAGATTATTAAAGAGCTAAACAATGAAT
TGGTTATTGTGAGTGGTTTAGCACGCGGAATTGATACTTCGGCTCACATGGCAGCATTGCAAAATGGTGGTCGAACAATT
GCAGTTATCGGAACGGGCCTAGATGTGTTTTATCCAAGGGCGAATAAGAAACTCCAATCGTATTTGGGAGAACATCATCT
AGTGCTTAGTGAGTATGGTTCTGAAGCAGAACCATTAAAATTTCATTTTCCAGAGCGTAATCGGATTATAGCAGGATTGT
GTAGAGGGGTTATTGTTGCTGAAGCTAAAATGCGCTCAGGCAGCCTTATTACTTGTGAGCGAGCAATGGAAGAAGGGCGA
GATGTATTTGCTATTCCAGGGTCAATTTTAGATGGAAGAAGTGATGGCTGTCATCATTTGATTCAGGAGGGAGCAAAATG
CATTACATCAGGGTCTGACGTACTTTCTGAATTCCAGTTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-60)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	76.429	100	0.764
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	76.071	100	0.761
dprA/cilB/dalA	Streptococcus pneumoniae D39	76.071	100	0.761
dprA/cilB/dalA	Streptococcus pneumoniae R6	76.071	100	0.761
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	76.071	100	0.761
dprA/cilB/dalA	Streptococcus mitis SK321	75.714	100	0.757
dprA	Streptococcus mutans UA159	65.357	100	0.654
dprA	Lactococcus lactis subsp. cremoris KW2	57.143	100	0.571
dprA	Legionella pneumophila strain ERS1305867	43.154	86.071	0.371