Detailed information NTG0089004

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: OCU45_RS18970
• Genome accession: NZ_AP024874
• Coordinates: 735286..737868 (-)
• Length: 860 a.a.
• NCBI ID: WP_072955669.1
• Uniprot ID: A0A1M4VME3
• Organism: Vibrio gazogenes strain ATCC 29988
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 730286..742868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU45_RS18950	-	732297..732509 (+)	213	WP_072955677.1	hypothetical protein	-
OCU45_RS18955	-	732614..732946 (+)	333	WP_072955674.1	hypothetical protein	-
OCU45_RS18960	-	733015..734490 (-)	1476	WP_072955672.1	cobyric acid synthase	-
OCU45_RS18965	-	734667..735194 (+)	528	WP_072955670.1	hypothetical protein	-
OCU45_RS18970	luxQ	735286..737868 (-)	2583	WP_072955669.1	LuxQ periplasmic sensor domain-containing protein	Regulator
OCU45_RS18975	-	737909..738990 (-)	1082	Protein_655	autoinducer 2-binding periplasmic protein LuxP	-
OCU45_RS18980	traF	739067..740212 (-)	1146	WP_072955667.1	conjugal transfer protein TraF	-
OCU45_RS18985	-	740279..740578 (-)	300	WP_072955665.1	GIY-YIG nuclease family protein	-
OCU45_RS18990	-	740585..741238 (-)	654	WP_072955664.1	YceH family protein	-
OCU45_RS18995	-	741702..742019 (+)	318	WP_021018699.1	DUF496 family protein	-
OCU45_RS19000	-	742232..742705 (+)	474	WP_021018698.1	peroxiredoxin	-

Sequence

Protein

• Length: 860 a.a.
• Molecular weight: 97077.37 Da
• Isoelectric Point: 5.2487

>NTDB_id=89004 OCU45_RS18970 WP_072955669.1 735286..737868(-) (luxQ) [Vibrio gazogenes strain ATCC 29988]
MNVRPSPIQQKQKIATYFTRAITIIIVILTFSVLFQNYQISSQLIAQEVQRTANQTSGLVQGMVNFRLSLLKIHQDGSAK
NADLLHAVSSGKSQYIDQYFRSVDQLDPDNTPDVRFIAGLNDMLWDDGNAQFYGIVSNELESVSHRIAVNSEWMLVKIPS
LLETVYALARRTPLVSNSGELNGYLYVMFVINNNYNLIEQIRSRSNSQNLILAIGSNVLSTTLNGEESYSEQDVLTHPQH
SDRLESYTVNTTELNVDGNPTQLIMYAVQDNQNVVKLKRNFYYGVVFILVATALFSFILWRWLHKRIRAEIEKLVQFSRS
IVDRGTEHVFHGSKIEEFDLFGRALEHTFKRLSEQEKQFENLFNFSIAPTILWGADGRLLRMNPAAVKQFSKENQVATFY
ELKERLIPSIKKASSGETLNEVATEFEDQTFRWTISPIVTEGRVESVLTQGQDVTTIAEAEKQSHLARSEAERAAGARAD
FLARMSHEVRTPLNGILGVSQLLKESVTDDKQREQVGVLCLCSEHLLAVLNDILDFSKIEQNKFKLNPVHFHLIETVRVI
ERIYQPLCQEKELELDVMTNIQEDTVVVVDQIRLNQIIFNLLNNAIKFTREGEICVLLNLNHSEGGAMFHVSISDTGIGI
GHDDLSLIFEPFIQGGTTSNREFGGSGLGLSIVKNLVELMGGDVSVSSQVGKGSCFEFTIPIEVELYHAKKEKEAIELDP
SGQLFEQSPHVLLVEDNKTNAYIAKAFCDRFGLRVTWVEDGTTAVETVKKMGFDLILMDNQLPGMDGVEVTDFVKHQLKL
DTPIYACTADDTEKTKNDFLHAGAEYILVKPIREENLYKALVHFRDSHWVPLTSSVLQSH

Nucleotide

• Length: 2583 bp

>NTDB_id=89004 OCU45_RS18970 WP_072955669.1 735286..737868(-) (luxQ) [Vibrio gazogenes strain ATCC 29988]
ATGAATGTCAGGCCGAGCCCTATTCAGCAGAAACAAAAGATAGCGACCTATTTTACTCGGGCGATTACAATTATTATTGT
CATTCTGACCTTTAGTGTCCTGTTTCAGAACTATCAGATCAGTAGTCAGTTGATCGCTCAGGAAGTGCAGCGAACGGCAA
ATCAGACCTCGGGATTAGTGCAGGGTATGGTTAACTTCCGTCTTTCTTTACTCAAAATCCATCAAGATGGTAGTGCGAAA
AATGCTGATTTATTACATGCGGTAAGTTCTGGGAAATCGCAATATATTGATCAATATTTTCGTTCCGTTGACCAGCTTGA
CCCGGATAATACCCCGGACGTTCGTTTTATTGCCGGGTTGAATGATATGCTGTGGGATGATGGGAATGCCCAGTTCTATG
GCATAGTGTCGAATGAATTGGAATCTGTTTCACACCGGATTGCAGTGAACAGTGAATGGATGTTGGTGAAAATACCGTCT
TTGCTGGAAACCGTTTATGCTTTGGCAAGAAGAACGCCGCTGGTAAGTAATTCTGGTGAACTGAACGGTTACTTATACGT
CATGTTTGTGATTAATAATAATTACAATCTTATCGAACAAATTCGCTCCCGCAGCAATTCGCAGAACTTGATTTTGGCGA
TCGGGTCCAATGTGCTTTCGACGACTCTCAACGGAGAAGAGTCATACTCAGAGCAGGATGTGCTTACTCATCCCCAACAT
TCTGATCGACTTGAGTCTTATACGGTCAACACGACCGAGCTCAATGTCGATGGTAATCCGACACAACTGATAATGTATGC
AGTTCAGGATAATCAGAACGTGGTTAAACTGAAGCGCAACTTTTATTATGGTGTCGTGTTTATTCTCGTGGCGACAGCAT
TGTTCTCTTTCATCTTGTGGCGATGGTTACATAAGCGCATTCGTGCTGAGATTGAAAAATTGGTGCAGTTTAGTCGCTCA
ATTGTGGATCGTGGGACCGAGCATGTTTTTCATGGCTCAAAGATTGAGGAATTTGACCTATTCGGGCGAGCACTTGAACA
TACCTTTAAGCGTTTATCTGAACAAGAAAAGCAATTTGAGAATTTGTTCAATTTCTCTATTGCACCAACCATTTTATGGG
GCGCGGATGGCCGTTTACTCCGGATGAATCCAGCCGCGGTGAAACAGTTTTCAAAAGAGAATCAGGTTGCGACGTTCTAT
GAACTGAAAGAACGATTAATCCCGAGCATCAAGAAGGCGTCCAGTGGTGAGACGCTGAACGAAGTCGCGACTGAGTTTGA
AGATCAAACATTCCGCTGGACGATTTCGCCGATAGTCACCGAAGGCCGGGTTGAGTCGGTTCTGACTCAAGGGCAAGATG
TTACGACTATCGCTGAAGCTGAAAAGCAAAGCCATTTGGCGCGCAGTGAAGCAGAGAGAGCTGCTGGTGCCAGAGCCGAT
TTTCTGGCTCGGATGAGTCATGAGGTCAGAACACCCTTAAATGGGATTTTGGGCGTGTCACAACTATTGAAAGAAAGTGT
GACGGATGATAAGCAGCGTGAACAGGTTGGCGTACTCTGTTTGTGTAGCGAACATCTGCTTGCGGTTTTGAATGATATTC
TTGATTTCTCCAAAATTGAGCAAAATAAGTTCAAACTGAATCCGGTTCATTTCCACTTGATCGAGACGGTTCGAGTCATC
GAGCGGATCTATCAGCCGTTATGTCAGGAAAAGGAACTTGAACTCGACGTTATGACCAATATTCAGGAAGATACCGTCGT
AGTAGTTGATCAAATCCGCTTGAATCAAATCATCTTTAATCTATTGAATAACGCGATTAAATTTACCCGTGAAGGTGAGA
TCTGTGTCCTGCTCAATTTAAACCATTCAGAAGGCGGGGCAATGTTTCACGTCTCCATCTCTGATACCGGTATTGGCATT
GGACATGATGACCTTTCGTTGATTTTTGAACCCTTTATTCAAGGTGGTACGACATCGAATCGCGAATTTGGTGGGAGTGG
TTTAGGGCTATCGATTGTGAAAAATTTAGTGGAACTCATGGGGGGAGACGTATCGGTTTCATCACAGGTCGGTAAAGGAA
GCTGCTTCGAGTTCACGATCCCGATTGAAGTTGAGCTATACCATGCTAAGAAAGAGAAAGAAGCGATTGAGCTGGATCCG
TCCGGCCAGTTATTCGAGCAATCTCCTCATGTACTATTAGTCGAAGATAATAAGACCAATGCCTATATCGCGAAGGCATT
CTGTGATCGTTTTGGTCTGCGGGTGACATGGGTTGAAGATGGAACGACTGCCGTTGAAACAGTTAAAAAAATGGGCTTTG
ATCTAATTTTGATGGATAACCAGTTGCCGGGGATGGATGGGGTTGAAGTCACCGATTTTGTGAAACATCAACTCAAGCTC
GATACACCCATTTATGCGTGTACTGCGGATGATACTGAAAAAACGAAAAATGATTTCTTACATGCAGGAGCCGAGTACAT
TCTGGTTAAACCCATTCGGGAAGAGAACTTATATAAAGCGCTGGTTCATTTCAGAGATAGCCACTGGGTACCACTGACGT
CGAGCGTGCTTCAATCACATTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (478-541)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

• Response regulator receiver domain (Response_reg) (731-841)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (590-703)

3D structure

• AlphaFold DB: A0A1M4VME3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	51.288	99.302	0.509