Detailed information NTG0876990

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RHO08_RS08835
• Genome accession: NZ_CP133809
• Coordinates: 1926312..1927433 (+)
• Length: 373 a.a.
• NCBI ID: WP_310826686.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain W22-979.1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1921312..1932433

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RHO08_RS08815 (RHO08_08815)	napG	1923491..1924243 (+)	753	WP_005718376.1	ferredoxin-type protein NapG	-
RHO08_RS08820 (RHO08_08820)	napH	1924243..1925118 (+)	876	WP_005757794.1	quinol dehydrogenase ferredoxin subunit NapH	-
RHO08_RS08825 (RHO08_08825)	-	1925124..1925549 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RHO08_RS08830 (RHO08_08830)	-	1925565..1926158 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
RHO08_RS08835 (RHO08_08835)	dprA	1926312..1927433 (+)	1122	WP_310826686.1	DNA-processing protein DprA	Machinery gene
RHO08_RS08840 (RHO08_08840)	lptD	1927539..1929887 (-)	2349	WP_059245856.1	LPS assembly protein LptD	-
RHO08_RS08845 (RHO08_08845)	-	1929951..1930502 (-)	552	WP_010907245.1	DNA-3-methyladenine glycosylase I	-
RHO08_RS08850 (RHO08_08850)	tal	1930660..1931613 (+)	954	WP_010907246.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41697.91 Da
• Isoelectric Point: 6.1373

>NTDB_id=876990 RHO08_RS08835 WP_310826686.1 1926312..1927433(+) (dprA) [Pasteurella multocida strain W22-979.1]
MSSYLPLLLRLLQIPRLGSLAIQRLLEHVSPAELMEYDTKAFQQIGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVDTLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGVLVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTDTSTINTARIMP
EHPELYAKIGYMPVSIDVLAQQVNLPVDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=876990 RHO08_RS08835 WP_310826686.1 1926312..1927433(+) (dprA) [Pasteurella multocida strain W22-979.1]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCAGCGTTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGATACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCAGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGTGTTAGTGTCTGAATTTTTACCTTTCCAACCCCCTGTGGCAGAAAATTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTATCTTTGGGGACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAAGTAACAGACACATCAACCATCAATACTGCGCGGATAATGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATTTACCTGT
TGATACCTTATTAGTACAGCTTTTAACCTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

• DprA winged helix domain (DprA_WH) (320-367)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.541	99.196	0.601
dprA	Glaesserella parasuis strain SC1401	52.571	93.834	0.493
dprA	Vibrio cholerae strain A1552	45.455	100	0.456
dprA	Vibrio campbellii strain DS40M4	45.135	99.196	0.448
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394