Detailed information NTG0874185

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: RDU00_RS02085
• Genome accession: NZ_CP133449
• Coordinates: 412747..413895 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain KK195
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 407747..418895

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDU00_RS02065 (RDU00_02075)	yclH	408124..408804 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
RDU00_RS02070 (RDU00_02080)	yclI	408820..410280 (-)	1461	WP_003234506.1	ABC transporter permease	-
RDU00_RS02075 (RDU00_02085)	yclJ	410493..411176 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
RDU00_RS02080 (RDU00_02090)	yclK	411163..412584 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
RDU00_RS02085 (RDU00_02095)	rapC	412747..413895 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
RDU00_RS02090 (RDU00_02100)	phrC	413879..414001 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
RDU00_RS02095 (RDU00_02105)	yczM	414101..414190 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
RDU00_RS02100 (RDU00_02110)	yczN	414272..414385 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
RDU00_RS02105 (RDU00_02115)	thrD	414539..415903 (-)	1365	WP_009966541.1	aspartate kinase	-
RDU00_RS02110 (RDU00_02120)	ceuB	416288..417238 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
RDU00_RS02115 (RDU00_02125)	yclO	417231..418178 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=874185 RDU00_RS02085 WP_003246686.1 412747..413895(+) (rapC) [Bacillus subtilis strain KK195]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=874185 RDU00_RS02085 WP_003246686.1 412747..413895(+) (rapC) [Bacillus subtilis strain KK195]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571