Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   RCG19_RS16455 Genome accession   NZ_CP133265
Coordinates   3304603..3305550 (+) Length   315 a.a.
NCBI ID   WP_308108014.1    Uniprot ID   -
Organism   Neobacillus sp. OS1-2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3299603..3310550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RCG19_RS16435 (RCG19_16435) clpB 3299743..3302337 (+) 2595 WP_308108011.1 ATP-dependent chaperone ClpB -
  RCG19_RS16440 (RCG19_16440) - 3302392..3302580 (-) 189 WP_166245842.1 YjzD family protein -
  RCG19_RS16445 (RCG19_16445) - 3302765..3303487 (+) 723 WP_308108012.1 hydrolase -
  RCG19_RS16450 (RCG19_16450) - 3303569..3304402 (+) 834 WP_308108013.1 hypothetical protein -
  RCG19_RS16455 (RCG19_16455) med 3304603..3305550 (+) 948 WP_308108014.1 BMP family ABC transporter substrate-binding protein Regulator
  RCG19_RS16460 (RCG19_16460) comZ 3305570..3305764 (+) 195 WP_374049552.1 ComZ family protein Regulator
  RCG19_RS16465 (RCG19_16465) - 3305796..3306089 (-) 294 WP_308108015.1 hypothetical protein -
  RCG19_RS16470 (RCG19_16470) - 3306300..3307232 (+) 933 WP_308111012.1 beta-ketoacyl-ACP synthase III -
  RCG19_RS16475 (RCG19_16475) fabF 3307334..3308572 (+) 1239 WP_166245830.1 beta-ketoacyl-ACP synthase II -
  RCG19_RS16480 (RCG19_16480) - 3308707..3309924 (+) 1218 WP_308111013.1 MerR family transcriptional regulator -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34907.55 Da        Isoelectric Point: 5.4173

>NTDB_id=872983 RCG19_RS16455 WP_308108014.1 3304603..3305550(+) (med) [Neobacillus sp. OS1-2]
MFNRFGIILLCLLLLGACGETKTPGKLQKVGLLVPETINDQVWGTKGYKGMLKIQSKFNVDVFYKEGMNSQAVVERAVEE
FEQKGVNLIFGHGSEYAEYFNTISKDHPKIHFVSFNGDAKTSNTTSLNFKAHAMGFFGGMVAAHMSKTNKVGVLAAYEWQ
PEIEGFYQGALAENKNTTVSIEYVGNWDDETRATQLAHQMLENGVDVVYPAGDGFNVPVIEQVKENGSYVIGYVSDQSDL
GESTVLTSTLQQVDALYEKVAAQYNEGKLKSGNLSFDFQDNVISLGKFSPLVPKDFIENMNKQIDQYKKTGKLPK

Nucleotide


Download         Length: 948 bp        

>NTDB_id=872983 RCG19_RS16455 WP_308108014.1 3304603..3305550(+) (med) [Neobacillus sp. OS1-2]
ATGTTTAACCGTTTCGGAATCATTCTTTTATGTCTTCTTTTACTTGGAGCTTGCGGGGAAACAAAAACGCCGGGTAAATT
ACAGAAGGTGGGCTTGTTGGTTCCAGAAACAATTAATGACCAAGTATGGGGAACAAAAGGCTACAAAGGAATGTTAAAAA
TACAGTCCAAATTTAATGTGGATGTATTTTATAAAGAAGGAATGAATTCACAAGCCGTTGTTGAACGGGCAGTAGAGGAA
TTTGAGCAAAAAGGTGTTAATCTAATCTTTGGGCATGGTTCGGAGTATGCGGAATACTTTAATACAATTTCGAAAGACCA
TCCAAAAATCCATTTCGTCAGTTTCAATGGTGATGCCAAGACGTCCAACACAACCAGTCTTAACTTTAAAGCACATGCGA
TGGGCTTTTTTGGTGGAATGGTTGCGGCACATATGTCTAAAACCAATAAAGTAGGTGTTTTAGCAGCATATGAATGGCAG
CCGGAAATTGAAGGTTTTTATCAAGGGGCATTAGCTGAAAATAAAAACACAACTGTAAGTATAGAATACGTTGGAAATTG
GGATGATGAGACAAGAGCCACTCAATTGGCACATCAAATGTTAGAAAATGGTGTCGATGTGGTTTATCCGGCTGGTGATG
GTTTTAATGTACCCGTTATCGAGCAAGTTAAGGAGAATGGTTCTTATGTGATTGGCTATGTTTCGGACCAATCAGACTTA
GGTGAATCAACCGTATTAACAAGCACTCTTCAGCAGGTGGACGCATTGTATGAAAAGGTAGCGGCACAATACAACGAAGG
CAAGTTAAAATCAGGTAACCTTTCATTTGATTTTCAAGATAATGTTATTTCACTGGGAAAATTTAGTCCATTGGTCCCTA
AAGATTTTATCGAAAATATGAACAAACAAATTGATCAATATAAGAAAACAGGTAAACTGCCTAAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

55.873

100

0.559