Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   KI216_RS12385 Genome accession   NZ_AP024595
Coordinates   2631197..2635654 (-) Length   1485 a.a.
NCBI ID   WP_005008061.1    Uniprot ID   N9DTB7
Organism   Acinetobacter bouvetii strain JCM 18991     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2626197..2640654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI216_RS12355 (ACBO_23950) elsL 2627312..2627803 (-) 492 WP_005008072.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  KI216_RS12360 (ACBO_23960) - 2627800..2628204 (-) 405 WP_005008071.1 YbaN family protein -
  KI216_RS12365 (ACBO_23970) - 2628291..2629154 (+) 864 WP_005008070.1 DUF1853 family protein -
  KI216_RS12370 (ACBO_23980) - 2629285..2629428 (+) 144 WP_099048129.1 entericidin A/B family lipoprotein -
  KI216_RS12375 (ACBO_23990) dapE 2629544..2630680 (+) 1137 WP_005008066.1 succinyl-diaminopimelate desuccinylase -
  KI216_RS12380 (ACBO_24000) - 2630747..2631193 (-) 447 WP_005008064.1 hypothetical protein -
  KI216_RS12385 (ACBO_24010) chpA 2631197..2635654 (-) 4458 WP_005008061.1 Hpt domain-containing protein Regulator
  KI216_RS12390 (ACBO_24020) - 2635823..2637895 (-) 2073 WP_005008060.1 methyl-accepting chemotaxis protein -
  KI216_RS12395 (ACBO_24030) - 2637939..2638475 (-) 537 WP_005008059.1 chemotaxis protein CheW -
  KI216_RS12400 (ACBO_24040) - 2638482..2638850 (-) 369 WP_005008058.1 response regulator -
  KI216_RS12405 (ACBO_24050) pilG 2638877..2639260 (-) 384 WP_005008057.1 twitching motility response regulator PilG Regulator
  KI216_RS12410 (ACBO_24060) - 2639541..2640188 (+) 648 WP_005008056.1 hypothetical protein -

Sequence


Protein


Download         Length: 1485 a.a.        Molecular weight: 165102.80 Da        Isoelectric Point: 4.3376

>NTDB_id=86312 KI216_RS12385 WP_005008061.1 2631197..2635654(-) (chpA) [Acinetobacter bouvetii strain JCM 18991]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFAELNSLFTGWLEEPNNPETLTTIRRHFHTLKGSGRMVGAKSA
GETAWIVEDTLNRVLSGTVVLTPVIQKFAQTVLNVYQYKLYPRFKTVEELDIDLRPLVLLGQQLQQGLSPEPALQELLSL
ADALNAPSVLTGLELADAAENAEAGTVSAAESEDHYIEETVSIFIEEAEEHLHTIDQFLKTENDQAQDYNGLIRALHTLR
GSSSMAQIDQIFEASTKVENLFKTLLQEDIVSTSKESALLIQYAEFVRDYLLTMRQGSSSQLDAIYETFSTAWNDYGFAA
EDVSADINPQGLVSKLIELNIDQLLDAEFEFDSRAKAEFPEYLTVLSSQAKLLLDHTDNRASAGIHAFTAELKQGYDVLV
EKPELMNLNYAYELFAQAHQEFIHLFDTLAAGQRVVLNAEAQKLLSELSAFVQQDVEQAAVHAQPKEAQTPLEAAVPAGV
DYAQLSQRIAAERAQLQSAEANKDFDEDLLAIFLEEADELLSGIDDDLSTWAKDQSNIGALNNLMRYLHTLKGGANMISA
THIGLIAHELEFVYERIIRQQIAINPALIQIIRLVQDDVSDRIQTIRDQNIDYPAHAVIDIVQNIQSLSAGQTAAVKVDA
AEEGLAADQAYAVEAVAEEPEQVFPAAVETEGSTAPAEETAPVEMPQPVLEQSADAADERVSSDEDQALRTVVEETFLEE
AEEVLENTEQLLAKWFEQRSDRSILLQLQRAAHSIKGGARMVENEPVAAISYQLETTFEQFAVHHFSSNVYDDLLQTTVS
WLKQAIFEKDYSNFDSIKFSLDSIEFVNVTAQLPNSFTRSEQSPASRGFEFIQGDGAEPPSMQGEWSDTLKSDNSNEMIR
ISADLVEKMIDLAGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQ
YSSLNQLSKSLAESASDLVDFKSTLSEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIVRQTSSTLNRPA
ELIVQNTEGELDRTILERLVTPFEHMLRNAIDHGLEDTADRIALNKPEVGNIVLNISRQGTDVLVTFSDDGKGIDEGKIK
AKALSQGLIKEDQLLDKQEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVTVESELGKGTSFTIRVPTTVA
VSDALMVKAGDQQFAISLAQIDRIVRIAPSALEDYFSSKADTFKIDNTHYKLRYLSEFVSNLPTPRLGQIAHSLPVLLIK
GNSGQTIALLVDQLIGSRAQIVVKPIGQQFSNVGVIAGATILGDGQVCLILDGQSIARQIQATQRVKRSKDQRDLSRHGN
ARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNLVRHHDIHQDLPII
MITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIESLIAEKQE

Nucleotide


Download         Length: 4458 bp        

>NTDB_id=86312 KI216_RS12385 WP_005008061.1 2631197..2635654(-) (chpA) [Acinetobacter bouvetii strain JCM 18991]
ATGAAAGAAATATTAAAAAATTTAGTAGAAACGACTACGCTTCCGGAAGACAGCTATCTAGATCAAGATGCAGAAATTTT
AGAAATTTTTGTTGAAGAAATAGAAGAAATCTTTGCTGAATTAAATTCTTTATTTACGGGTTGGCTAGAAGAACCGAACA
ATCCAGAAACGCTGACTACGATTCGCCGCCATTTCCATACTTTAAAAGGTTCTGGACGCATGGTGGGCGCCAAATCTGCC
GGTGAAACTGCATGGATCGTGGAAGATACGCTTAACCGTGTGCTTTCAGGCACAGTTGTGCTGACGCCCGTCATCCAGAA
ATTTGCTCAAACAGTTTTAAATGTTTATCAGTATAAGTTGTATCCGCGGTTTAAAACGGTAGAAGAGCTGGATATTGACT
TGCGCCCTTTGGTTTTATTGGGCCAGCAGCTGCAGCAGGGACTCAGCCCTGAGCCGGCACTGCAAGAATTATTAAGCCTG
GCCGATGCTTTAAATGCGCCAAGCGTGTTGACCGGCCTCGAACTGGCTGATGCAGCTGAAAATGCGGAAGCAGGAACAGT
CTCTGCTGCTGAAAGTGAAGACCACTATATTGAAGAAACAGTTTCGATCTTTATTGAAGAAGCTGAAGAGCATTTGCATA
CCATTGATCAGTTCCTGAAAACAGAAAATGATCAAGCTCAGGATTATAATGGCCTGATCCGCGCCTTGCATACCCTGCGC
GGCAGCTCATCAATGGCGCAAATTGATCAGATTTTTGAAGCCAGCACAAAAGTTGAAAACCTGTTTAAAACCTTGCTGCA
GGAAGACATTGTCTCTACCTCAAAAGAAAGCGCATTGCTGATTCAGTACGCTGAATTTGTCCGTGACTATCTGCTGACTA
TGCGTCAAGGCTCCAGCAGCCAGCTGGATGCGATCTATGAAACATTCAGCACAGCATGGAATGATTACGGTTTTGCCGCT
GAAGACGTCAGCGCAGATATTAACCCGCAAGGCTTAGTGTCTAAGCTGATCGAATTGAATATTGATCAGCTGCTGGATGC
AGAGTTTGAATTTGACAGCCGCGCTAAGGCTGAGTTTCCAGAATATCTGACTGTGTTGAGTTCACAGGCGAAATTGCTGC
TGGATCACACGGATAACCGCGCTTCCGCAGGAATCCATGCATTCACTGCAGAATTGAAGCAGGGCTATGATGTGCTGGTC
GAGAAGCCAGAACTGATGAACCTCAACTATGCGTATGAACTGTTTGCGCAAGCGCATCAAGAGTTTATCCATTTGTTCGA
TACCTTGGCTGCAGGTCAGCGTGTGGTTTTGAATGCTGAAGCGCAAAAATTGCTCAGTGAACTGTCTGCTTTTGTTCAGC
AGGATGTAGAGCAGGCTGCTGTTCATGCACAGCCAAAAGAAGCGCAGACTCCGCTAGAAGCAGCTGTTCCGGCTGGTGTG
GACTATGCGCAGTTAAGTCAGCGGATTGCCGCGGAGCGCGCTCAGCTTCAATCTGCTGAGGCAAATAAAGACTTTGATGA
AGACTTGCTGGCTATCTTCCTGGAAGAAGCGGATGAACTGCTGTCGGGTATTGATGATGATTTAAGCACTTGGGCAAAAG
ATCAAAGCAATATTGGCGCCCTGAACAATTTAATGCGTTATTTGCACACCTTGAAAGGCGGTGCAAATATGATTTCAGCA
ACACATATCGGCTTAATTGCACATGAGCTGGAATTTGTTTATGAACGCATTATCCGCCAGCAAATTGCCATCAATCCAGC
GCTGATTCAAATCATCCGCTTAGTTCAGGATGATGTTTCTGACCGTATCCAGACGATCCGTGATCAAAATATCGATTATC
CTGCGCATGCCGTGATTGATATTGTTCAAAACATTCAGTCTCTATCTGCAGGGCAAACTGCCGCTGTTAAAGTAGATGCC
GCTGAGGAAGGGCTGGCGGCGGATCAAGCATATGCGGTGGAAGCTGTTGCGGAAGAGCCAGAACAGGTATTTCCAGCTGC
AGTTGAAACTGAAGGCAGTACCGCGCCTGCAGAAGAAACAGCACCGGTCGAAATGCCTCAGCCTGTGCTTGAGCAAAGCG
CAGATGCAGCGGATGAGCGGGTTAGCTCGGATGAAGATCAGGCGCTGCGGACTGTTGTTGAGGAAACCTTCTTGGAAGAA
GCTGAAGAAGTATTGGAAAATACAGAACAGCTGCTGGCAAAATGGTTTGAACAGCGCAGTGACCGCAGCATTTTGCTTCA
ACTGCAGCGTGCAGCCCACAGTATTAAAGGCGGCGCGCGTATGGTGGAGAATGAGCCTGTTGCGGCGATTTCTTACCAGC
TTGAAACAACCTTTGAGCAATTTGCTGTACATCATTTCAGCTCTAATGTTTATGATGATTTGCTGCAAACGACTGTCAGC
TGGTTAAAGCAGGCGATCTTCGAGAAAGACTACAGCAATTTTGACAGCATTAAATTCAGTCTGGATTCAATTGAATTTGT
CAATGTAACAGCACAGCTGCCGAACAGCTTCACGCGGTCTGAGCAAAGCCCTGCGTCGCGCGGTTTTGAATTCATCCAAG
GCGATGGCGCAGAGCCGCCATCGATGCAAGGTGAATGGTCAGATACGCTTAAGTCAGACAACAGCAACGAGATGATCCGA
ATTTCGGCTGATCTGGTTGAGAAAATGATTGACTTGGCGGGCGAAAACTCAATCAACCGTTCGCGTATTGAGATGGATTT
GGGACAGCTGGGCAATACCCTGAACGAGATGGAATTGGCCATCAAGCGTTTGGCTGACCAGCTGCGCCGAATGGAAGGCG
AGTTGGAGTCGCAGATTATTGCGAAGCATGGCTCTGAAAATTCGCGCTATGCCGATTTTGACCCATTGGAAATGGACCAG
TATTCATCGCTGAACCAGCTGTCTAAATCTTTGGCTGAATCAGCATCGGATTTGGTTGACTTTAAGAGTACGCTGTCTGA
AAAAATCCGCGATACCGAAGGCTTGCTGCTTCAGCAATCACGCATTCAGGCCGAAATTCAAGAAAGCCTGATGCGCACCC
GTCTGGTGCCGTTCTCGCGCATGCTGCCGCGTTTGCAGCGTATTGTGCGTCAAACTTCATCTACCTTGAACCGTCCCGCA
GAATTGATTGTGCAGAATACCGAAGGTGAGCTGGACCGTACAATTTTAGAGCGCCTGGTGACGCCATTTGAGCACATGCT
CCGTAATGCGATCGACCATGGCTTGGAAGATACGGCTGACCGCATAGCGCTGAACAAGCCGGAAGTGGGCAACATTGTTT
TAAACATCAGCCGTCAAGGCACCGATGTTTTGGTCACGTTCAGTGATGACGGCAAAGGCATTGATGAAGGGAAGATTAAG
GCCAAAGCCTTAAGTCAAGGTTTGATCAAAGAAGATCAGCTCTTGGATAAGCAGGAAATTCTGCAGCTGATTTTCCATCC
GGGCTTCAGTACCGCGCAGGCTGTTACGCAAATTTCCGGACGCGGGGTAGGTCTGGATGTTGTGCAAAGTGAAATTAAAG
CGCTGGGCGGGCATGTAACGGTCGAGTCTGAATTGGGCAAAGGCACGTCCTTTACCATCCGTGTGCCGACCACCGTGGCG
GTCAGTGATGCCTTGATGGTGAAAGCCGGTGATCAGCAGTTTGCGATTTCTCTGGCGCAAATTGACCGTATTGTGCGTAT
TGCGCCGTCAGCGCTGGAAGACTATTTCAGCAGCAAGGCAGATACCTTTAAAATTGACAATACGCATTACAAATTGCGCT
ATTTATCCGAGTTCGTTTCTAATTTGCCTACACCGCGTTTAGGCCAAATCGCGCACTCCTTGCCGGTGCTGCTGATTAAA
GGCAACAGCGGCCAAACCATTGCGCTGCTGGTTGATCAGCTGATTGGCTCGCGTGCGCAAATTGTAGTTAAGCCAATTGG
CCAGCAGTTCTCTAATGTTGGCGTGATCGCAGGCGCGACGATTCTGGGTGATGGCCAAGTTTGCTTAATTTTGGACGGCC
AGAGCATTGCGCGTCAGATTCAGGCGACACAGCGCGTTAAGCGCAGTAAAGATCAGCGTGATCTGTCACGCCACGGCAAT
GCGCGCCGCTTAGTCATGATTGTGGATGACTCGGTAACGGTGCGTAAGGTGACATCTCGCTTGCTGGAACGTCAAGGCTA
TGACATTGTGACGGCGAAAGATGGTGTGGACGCCATAGAACAGCTGGAAAATGTAAGACCAGACTTGATGCTGCTGGATA
TTGAAATGCCGCGCATGGATGGTTTTGAAGTGACGAACTTGGTTCGCCATCATGACATTCACCAAGACTTGCCGATTATC
ATGATTACCTCGCGTACTGGTGAAAAACACCGTGAGCGCGCGTTCAGCTTGGGTGTAACGCACTATATGGGCAAGCCGTT
CCAGGAAGCGGAACTGCTGGCCAATATTGAAAGTTTAATTGCAGAGAAACAGGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.421

100

0.623


Multiple sequence alignment